| RVdb StrainID | ANM07920 | GenBank Accession | FJ445163.1 |
| Species | RVA | Sequence Length | 7140 nt |
| Serotype | 85 Checked by RVdb | Serotype (GenBank) | 85 |
| Definition | Human rhinovirus 85 strain ATCC VR-1195, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1195 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185937 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA014792 | 1A (VP4) | 615 | 821 | 0 | 0 | 207 | |
| SQA014793 | 1B (VP2) | 822 | 1619 | 0 | 0 | 798 | |
| SQA014794 | 1C (VP3) | 1620 | 2333 | 0 | 0 | 714 | |
| SQA014795 | 1D (VP1) | 2334 | 3191 | 0 | 0 | 858 | |
| SQA014796 | 2A (P2-A) | 3192 | 3617 | 0 | 0 | 426 | |
| SQA014797 | 2B (P2-B) | 3618 | 3902 | 0 | 0 | 285 | |
| SQA014798 | 2C (P2-C) | 3903 | 4868 | 0 | 0 | 966 | |
| SQA014799 | 3'UTR | 7095 | 7140 | 0 | 0 | 46 | |
| SQA014800 | 3A (P3-A) | 4869 | 5099 | 0 | 0 | 231 | |
| SQA014801 | 3B (VPg) | 5100 | 5162 | 0 | 0 | 63 | |
| SQA014802 | protease 3C | 5163 | 5711 | 0 | 0 | 549 | |
| SQA014803 | 3D | 5712 | 7091 | 0 | 0 | 1380 | |
| SQA014804 | 5'UTR | 1 | 614 | 0 | 0 | 614 | |
| SQA014805 | CDS | 615 | 7094 | 0 | 0 | 6480 | |
| SQA014806 | VP4/2 | 615 | 1050 | 0 | 0 | 436 | |
| SQA014807 | genome | 1 | 7140 | 0 | 0 | 7140 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001672 | protease 3C | 1517 | 1699 | 0 | 0 | 183 | |
| SPA001673 | 3D | 1700 | 2159 | 0 | 0 | 460 | |
| SPA001674 | 3B (VPg) | 1496 | 1516 | 0 | 0 | 21 | |
| SPA001675 | 3A (P3-A) | 1419 | 1495 | 0 | 0 | 77 | |
| SPA001676 | 2C (P2-C) | 1097 | 1418 | 0 | 0 | 322 | |
| SPA001677 | 2B (P2-B) | 1002 | 1096 | 0 | 0 | 95 | |
| SPA001678 | 2A (P2-A) | 860 | 1001 | 0 | 0 | 142 | |
| SPA001679 | 1D (VP1) | 574 | 859 | 0 | 0 | 286 | |
| SPA001680 | 1C (VP3) | 336 | 573 | 0 | 0 | 238 | |
| SPA001681 | 1B (VP2) | 70 | 335 | 0 | 0 | 266 | |
| SPA001682 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001683 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001684 | CDS | 1 | 2159 | 0 | 0 | 2159 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |