| RVdb StrainID | ANM07915 | GenBank Accession | FJ445171.1 |
| Species | RVA | Sequence Length | 7134 nt |
| Serotype | 96 Checked by RVdb | Serotype (GenBank) | 96 |
| Definition | Human rhinovirus 96 strain ATCC VR-1296, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1296 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185943 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA014776 | 1A (VP4) | 618 | 824 | 0 | 0 | 207 | |
| SQA014777 | 1B (VP2) | 825 | 1607 | 0 | 0 | 783 | |
| SQA014778 | 1C (VP3) | 1608 | 2321 | 0 | 0 | 714 | |
| SQA014779 | 1D (VP1) | 2322 | 3188 | 0 | 0 | 867 | |
| SQA014780 | 2A (P2-A) | 3189 | 3614 | 0 | 0 | 426 | |
| SQA014781 | 2B (P2-B) | 3615 | 3899 | 0 | 0 | 285 | |
| SQA014782 | 2C (P2-C) | 3900 | 4865 | 0 | 0 | 966 | |
| SQA014783 | 3'UTR | 7092 | 7134 | 0 | 0 | 43 | |
| SQA014784 | 3A (P3-A) | 4866 | 5096 | 0 | 0 | 231 | |
| SQA014785 | 3B (VPg) | 5097 | 5159 | 0 | 0 | 63 | |
| SQA014786 | protease 3C | 5160 | 5708 | 0 | 0 | 549 | |
| SQA014787 | 3D | 5709 | 7088 | 0 | 0 | 1380 | |
| SQA014788 | 5'UTR | 1 | 617 | 0 | 0 | 617 | |
| SQA014789 | CDS | 618 | 7091 | 0 | 0 | 6474 | |
| SQA014790 | VP4/2 | 618 | 1052 | 0 | 0 | 435 | |
| SQA014791 | genome | 1 | 7134 | 0 | 0 | 7134 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001737 | protease 3C | 1515 | 1697 | 0 | 0 | 183 | |
| SPA001738 | 3D | 1698 | 2157 | 0 | 0 | 460 | |
| SPA001739 | 3B (VPg) | 1494 | 1514 | 0 | 0 | 21 | |
| SPA001740 | 3A (P3-A) | 1417 | 1493 | 0 | 0 | 77 | |
| SPA001741 | 2C (P2-C) | 1095 | 1416 | 0 | 0 | 322 | |
| SPA001742 | 2B (P2-B) | 1000 | 1094 | 0 | 0 | 95 | |
| SPA001743 | 2A (P2-A) | 858 | 999 | 0 | 0 | 142 | |
| SPA001744 | 1D (VP1) | 569 | 857 | 0 | 0 | 289 | |
| SPA001745 | 1C (VP3) | 331 | 568 | 0 | 0 | 238 | |
| SPA001746 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
| SPA001747 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001748 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001749 | CDS | 1 | 2157 | 0 | 0 | 2157 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |