| RVdb StrainID | ANM07215 | GenBank Accession | JN621245.1 |
| Species | RVA | Sequence Length | 6844 nt |
| Serotype | 67 Checked by RVdb | Serotype (GenBank) | 67 |
| Definition | Human rhinovirus A strain HRV-A67_p1130_sR2849_2008 polyprotein gene, partial cds | GenBank Submission Date | 2017-01-25 |
| Strain Name | HRV-A67_p1130_sR2849_2008 | Sampling Date | 2008-09-13 |
| Sampling Country | USA | Sampling location | Madison, WI |
| Isolation Source | oronasal secretion [ENVO:02000035] | NCBI Taxon ID | 147711 |
| Sequencing Technology | Illumina | Assembly Method | Velvet v. 1.1.04 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA014267 | 1A (VP4) | 549 | 755 | 0 | 0 | 207 | |
| SQA014268 | 1B (VP2) | 756 | 1541 | 0 | 0 | 786 | |
| SQA014269 | 1C (VP3) | 1542 | 2255 | 0 | 0 | 714 | |
| SQA014270 | 1D (VP1) | 2256 | 3122 | 0 | 0 | 867 | |
| SQA014271 | 2A (P2-A) | 3123 | 3548 | 0 | 0 | 426 | |
| SQA014272 | 2B (P2-B) | 3549 | 3833 | 0 | 0 | 285 | |
| SQA014273 | 2C (P2-C) | 3834 | 4799 | 0 | 0 | 966 | |
| SQA014274 | 3A (P3-A) | 4800 | 5030 | 0 | 0 | 231 | |
| SQA014275 | 3B (VPg) | 5031 | 5093 | 0 | 0 | 63 | |
| SQA014276 | protease 3C | 5094 | 5642 | 0 | 0 | 549 | |
| SQA014277 | 3D | 5643 | 6844 | 0 | 1 | 1202 | |
| SQA014278 | 5'UTR | 1 | 548 | 1 | 0 | 548 | |
| SQA014279 | CDS | 549 | 6844 | 0 | 1 | 6296 | |
| SQA014280 | VP4/2 | 549 | 983 | 0 | 0 | 435 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA003575 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA003576 | 3D | 1699 | 2099 | 0 | 1 | 401 | |
| SPA003577 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 | |
| SPA003578 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA003579 | 2C (P2-C) | 1096 | 1417 | 0 | 0 | 322 | |
| SPA003580 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA003581 | 2A (P2-A) | 859 | 1000 | 0 | 0 | 142 | |
| SPA003582 | 1D (VP1) | 570 | 858 | 0 | 0 | 289 | |
| SPA003583 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA003584 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA003585 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA003586 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA003587 | CDS | 1 | 2099 | 0 | 0 | 2099 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675855 | Genome sequences of rhinovirus a isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |