| RVdb StrainID | ANC07959 | GenBank Accession | FJ445116.1 |
| Species | RVA | Sequence Length | 7140 nt |
| Serotype | 13 Checked by RVdb | Serotype (GenBank) | 13 |
| Definition | Human rhinovirus 13 strain ATCC VR-1123, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1123 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185893 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA007021 | 1A (VP4) | 616 | 822 | 0 | 0 | 207 | |
| SQA007022 | 1B (VP2) | 823 | 1611 | 0 | 0 | 789 | |
| SQA007023 | 1C (VP3) | 1612 | 2325 | 0 | 0 | 714 | |
| SQA007024 | 1D (VP1) | 2326 | 3195 | 0 | 0 | 870 | |
| SQA007025 | 2A (P2-A) | 3196 | 3621 | 0 | 0 | 426 | |
| SQA007026 | 2B (P2-B) | 3622 | 3906 | 0 | 0 | 285 | |
| SQA007027 | 2C (P2-C) | 3907 | 4872 | 0 | 0 | 966 | |
| SQA007028 | 3'UTR | 7099 | 7140 | 0 | 0 | 42 | |
| SQA007029 | 3A (P3-A) | 4873 | 5103 | 0 | 0 | 231 | |
| SQA007030 | 3B (VPg) | 5104 | 5166 | 0 | 0 | 63 | |
| SQA007031 | protease 3C | 5167 | 5715 | 0 | 0 | 549 | |
| SQA007032 | 3D | 5716 | 7095 | 0 | 0 | 1380 | |
| SQA007033 | 5'UTR | 1 | 615 | 0 | 0 | 615 | |
| SQA007034 | CDS | 616 | 7098 | 0 | 0 | 6483 | |
| SQA007035 | VP4/2 | 616 | 1050 | 0 | 0 | 435 | |
| SQA007036 | genome | 1 | 7140 | 0 | 0 | 7140 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001165 | protease 3C | 1518 | 1700 | 0 | 0 | 183 | |
| SPA001166 | 3D | 1701 | 2160 | 0 | 0 | 460 | |
| SPA001167 | 3B (VPg) | 1497 | 1517 | 0 | 0 | 21 | |
| SPA001168 | 3A (P3-A) | 1420 | 1496 | 0 | 0 | 77 | |
| SPA001169 | 2C (P2-C) | 1098 | 1419 | 0 | 0 | 322 | |
| SPA001170 | 2B (P2-B) | 1003 | 1097 | 0 | 0 | 95 | |
| SPA001171 | 2A (P2-A) | 861 | 1002 | 0 | 0 | 142 | |
| SPA001172 | 1D (VP1) | 571 | 860 | 0 | 0 | 290 | |
| SPA001173 | 1C (VP3) | 333 | 570 | 0 | 0 | 238 | |
| SPA001174 | 1B (VP2) | 70 | 332 | 0 | 0 | 263 | |
| SPA001175 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001176 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001177 | CDS | 1 | 2160 | 0 | 0 | 2160 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |