| RVdb StrainID | ANC07944 | GenBank Accession | FJ445133.1 |
| Species | RVA | Sequence Length | 7132 nt |
| Serotype | 47 Checked by RVdb | Serotype (GenBank) | 47 |
| Definition | Human rhinovirus 47 strain ATCC VR-1157, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1157 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185911 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA006973 | 1A (VP4) | 613 | 819 | 0 | 0 | 207 | |
| SQA006974 | 1B (VP2) | 820 | 1614 | 0 | 0 | 795 | |
| SQA006975 | 1C (VP3) | 1615 | 2328 | 0 | 0 | 714 | |
| SQA006976 | 1D (VP1) | 2329 | 3183 | 0 | 0 | 855 | |
| SQA006977 | 2A (P2-A) | 3184 | 3609 | 0 | 0 | 426 | |
| SQA006978 | 2B (P2-B) | 3610 | 3894 | 0 | 0 | 285 | |
| SQA006979 | 2C (P2-C) | 3895 | 4860 | 0 | 0 | 966 | |
| SQA006980 | 3'UTR | 7087 | 7132 | 0 | 0 | 46 | |
| SQA006981 | 3A (P3-A) | 4861 | 5091 | 0 | 0 | 231 | |
| SQA006982 | 3B (VPg) | 5092 | 5154 | 0 | 0 | 63 | |
| SQA006983 | protease 3C | 5155 | 5703 | 0 | 0 | 549 | |
| SQA006984 | 3D | 5704 | 7083 | 0 | 0 | 1380 | |
| SQA006985 | 5'UTR | 1 | 612 | 0 | 0 | 612 | |
| SQA006986 | CDS | 613 | 7086 | 0 | 0 | 6474 | |
| SQA006987 | VP4/2 | 613 | 1047 | 0 | 0 | 435 | |
| SQA006988 | genome | 1 | 7132 | 0 | 0 | 7132 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001360 | protease 3C | 1515 | 1697 | 0 | 0 | 183 | |
| SPA001361 | 3D | 1698 | 2157 | 0 | 0 | 460 | |
| SPA001362 | 3B (VPg) | 1494 | 1514 | 0 | 0 | 21 | |
| SPA001363 | 3A (P3-A) | 1417 | 1493 | 0 | 0 | 77 | |
| SPA001364 | 2C (P2-C) | 1095 | 1416 | 0 | 0 | 322 | |
| SPA001365 | 2B (P2-B) | 1000 | 1094 | 0 | 0 | 95 | |
| SPA001366 | 2A (P2-A) | 858 | 999 | 0 | 0 | 142 | |
| SPA001367 | 1D (VP1) | 573 | 857 | 0 | 0 | 285 | |
| SPA001368 | 1C (VP3) | 335 | 572 | 0 | 0 | 238 | |
| SPA001369 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA001370 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001371 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001372 | CDS | 1 | 2157 | 0 | 0 | 2157 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |