| RVdb StrainID | ANC07934 | GenBank Accession | FJ445144.1 |
| Species | RVA | Sequence Length | 7139 nt |
| Serotype | 61 Checked by RVdb | Serotype (GenBank) | 61 |
| Definition | Human rhinovirus 61 strain ATCC VR-1171, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1171 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185920 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA006941 | 1A (VP4) | 619 | 825 | 0 | 0 | 207 | |
| SQA006942 | 1B (VP2) | 826 | 1608 | 0 | 0 | 783 | |
| SQA006943 | 1C (VP3) | 1609 | 2322 | 0 | 0 | 714 | |
| SQA006944 | 1D (VP1) | 2323 | 3198 | 0 | 0 | 876 | |
| SQA006945 | 2A (P2-A) | 3199 | 3624 | 0 | 0 | 426 | |
| SQA006946 | 2B (P2-B) | 3625 | 3909 | 0 | 0 | 285 | |
| SQA006947 | 2C (P2-C) | 3910 | 4875 | 0 | 0 | 966 | |
| SQA006948 | 3'UTR | 7102 | 7139 | 0 | 0 | 38 | |
| SQA006949 | 3A (P3-A) | 4876 | 5106 | 0 | 0 | 231 | |
| SQA006950 | 3B (VPg) | 5107 | 5169 | 0 | 0 | 63 | |
| SQA006951 | protease 3C | 5170 | 5718 | 0 | 0 | 549 | |
| SQA006952 | 3D | 5719 | 7098 | 0 | 0 | 1380 | |
| SQA006953 | 5'UTR | 1 | 618 | 0 | 0 | 618 | |
| SQA006954 | CDS | 619 | 7101 | 0 | 0 | 6483 | |
| SQA006955 | VP4/2 | 619 | 1053 | 0 | 0 | 435 | |
| SQA006956 | genome | 1 | 7139 | 0 | 0 | 7139 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001490 | protease 3C | 1518 | 1700 | 0 | 0 | 183 | |
| SPA001491 | 3D | 1701 | 2160 | 0 | 0 | 460 | |
| SPA001492 | 3B (VPg) | 1497 | 1517 | 0 | 0 | 21 | |
| SPA001493 | 3A (P3-A) | 1420 | 1496 | 0 | 0 | 77 | |
| SPA001494 | 2C (P2-C) | 1098 | 1419 | 0 | 0 | 322 | |
| SPA001495 | 2B (P2-B) | 1003 | 1097 | 0 | 0 | 95 | |
| SPA001496 | 2A (P2-A) | 861 | 1002 | 0 | 0 | 142 | |
| SPA001497 | 1D (VP1) | 569 | 860 | 0 | 0 | 292 | |
| SPA001498 | 1C (VP3) | 331 | 568 | 0 | 0 | 238 | |
| SPA001499 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
| SPA001500 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001501 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001502 | CDS | 1 | 2160 | 0 | 0 | 2160 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |