| RVdb StrainID | ANC07919 | GenBank Accession | FJ445165.1 |
| Species | RVA | Sequence Length | 7150 nt |
| Serotype | 89 Checked by RVdb | Serotype (GenBank) | 89 |
| Definition | Human rhinovirus 89 isolate F09, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | F09 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 12132 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA006893 | 1A (VP4) | 617 | 823 | 0 | 0 | 207 | |
| SQA006894 | 1B (VP2) | 824 | 1624 | 0 | 0 | 801 | |
| SQA006895 | 1C (VP3) | 1625 | 2338 | 0 | 0 | 714 | |
| SQA006896 | 1D (VP1) | 2339 | 3214 | 0 | 0 | 876 | |
| SQA006897 | 2A (P2-A) | 3215 | 3640 | 0 | 0 | 426 | |
| SQA006898 | 2B (P2-B) | 3641 | 3925 | 0 | 0 | 285 | |
| SQA006899 | 2C (P2-C) | 3926 | 4888 | 0 | 0 | 963 | |
| SQA006900 | 3'UTR | 7112 | 7150 | 0 | 0 | 39 | |
| SQA006901 | 3A (P3-A) | 4889 | 5116 | 0 | 0 | 228 | |
| SQA006902 | 3B (VPg) | 5117 | 5179 | 0 | 0 | 63 | |
| SQA006903 | protease 3C | 5180 | 5728 | 0 | 0 | 549 | |
| SQA006904 | 3D | 5729 | 7108 | 0 | 0 | 1380 | |
| SQA006905 | 5'UTR | 1 | 616 | 0 | 0 | 616 | |
| SQA006906 | CDS | 617 | 7111 | 0 | 0 | 6495 | |
| SQA006907 | VP4/2 | 617 | 1051 | 0 | 0 | 435 | |
| SQA006908 | genome | 1 | 7150 | 0 | 0 | 7150 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001685 | protease 3C | 1522 | 1704 | 0 | 0 | 183 | |
| SPA001686 | 3D | 1705 | 2164 | 0 | 0 | 460 | |
| SPA001687 | 3B (VPg) | 1501 | 1521 | 0 | 0 | 21 | |
| SPA001688 | 3A (P3-A) | 1425 | 1500 | 0 | 0 | 76 | |
| SPA001689 | 2C (P2-C) | 1104 | 1424 | 0 | 0 | 321 | |
| SPA001690 | 2B (P2-B) | 1009 | 1103 | 0 | 0 | 95 | |
| SPA001691 | 2A (P2-A) | 867 | 1008 | 0 | 0 | 142 | |
| SPA001692 | 1D (VP1) | 575 | 866 | 0 | 0 | 292 | |
| SPA001693 | 1C (VP3) | 337 | 574 | 0 | 0 | 238 | |
| SPA001694 | 1B (VP2) | 70 | 336 | 0 | 0 | 267 | |
| SPA001695 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001696 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001697 | CDS | 1 | 2164 | 0 | 0 | 2164 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |