| RVdb StrainID | ANC07909 | GenBank Accession | FJ445179.1 |
| Species | RVA | Sequence Length | 7093 nt |
| Serotype | 30 Checked by RVdb | Serotype (GenBank) | 30 |
| Definition | Human rhinovirus 30 strain ATCC VR-1140, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1140 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185901 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA006861 | 1A (VP4) | 603 | 809 | 0 | 0 | 207 | |
| SQA006862 | 1B (VP2) | 810 | 1592 | 0 | 0 | 783 | |
| SQA006863 | 1C (VP3) | 1593 | 2300 | 0 | 0 | 708 | |
| SQA006864 | 1D (VP1) | 2301 | 3149 | 0 | 0 | 849 | |
| SQA006865 | 2A (P2-A) | 3150 | 3575 | 0 | 0 | 426 | |
| SQA006866 | 2B (P2-B) | 3576 | 3860 | 0 | 0 | 285 | |
| SQA006867 | 2C (P2-C) | 3861 | 4826 | 0 | 0 | 966 | |
| SQA006868 | 3'UTR | 7053 | 7093 | 0 | 0 | 41 | |
| SQA006869 | 3A (P3-A) | 4827 | 5057 | 0 | 0 | 231 | |
| SQA006870 | 3B (VPg) | 5058 | 5120 | 0 | 0 | 63 | |
| SQA006871 | protease 3C | 5121 | 5669 | 0 | 0 | 549 | |
| SQA006872 | 3D | 5670 | 7049 | 0 | 0 | 1380 | |
| SQA006873 | 5'UTR | 1 | 602 | 1 | 0 | 602 | |
| SQA006874 | CDS | 603 | 7052 | 0 | 0 | 6450 | |
| SQA006875 | VP4/2 | 603 | 1037 | 0 | 0 | 435 | |
| SQA006876 | genome | 1 | 7093 | 1 | 0 | 7093 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001815 | protease 3C | 1508 | 1689 | 0 | 0 | 182 | |
| SPA001816 | 3D | 1690 | 2149 | 0 | 0 | 460 | |
| SPA001817 | 3B (VPg) | 1486 | 1507 | 0 | 0 | 22 | |
| SPA001818 | 3A (P3-A) | 1409 | 1485 | 0 | 0 | 77 | |
| SPA001819 | 2C (P2-C) | 1087 | 1408 | 0 | 0 | 322 | |
| SPA001820 | 2B (P2-B) | 992 | 1086 | 0 | 0 | 95 | |
| SPA001821 | 2A (P2-A) | 850 | 991 | 0 | 0 | 142 | |
| SPA001822 | 1D (VP1) | 567 | 849 | 0 | 0 | 283 | |
| SPA001823 | 1C (VP3) | 331 | 566 | 0 | 0 | 236 | |
| SPA001824 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
| SPA001825 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001826 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001827 | CDS | 1 | 2149 | 0 | 0 | 2149 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |