| RVdb StrainID | ANC07904 | GenBank Accession | FJ445184.1 |
| Species | RVA | Sequence Length | 7152 nt |
| Serotype | 89 Checked by RVdb | Serotype (GenBank) | 89 |
| Definition | Human rhinovirus 89 strain ATCC VR-1199, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1199 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 12132 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA006845 | 1A (VP4) | 619 | 825 | 0 | 0 | 207 | |
| SQA006846 | 1B (VP2) | 826 | 1626 | 0 | 0 | 801 | |
| SQA006847 | 1C (VP3) | 1627 | 2340 | 0 | 0 | 714 | |
| SQA006848 | 1D (VP1) | 2341 | 3216 | 0 | 0 | 876 | |
| SQA006849 | 2A (P2-A) | 3217 | 3642 | 0 | 0 | 426 | |
| SQA006850 | 2B (P2-B) | 3643 | 3927 | 0 | 0 | 285 | |
| SQA006851 | 2C (P2-C) | 3928 | 4890 | 0 | 0 | 963 | |
| SQA006852 | 3'UTR | 7114 | 7152 | 0 | 0 | 39 | |
| SQA006853 | 3A (P3-A) | 4891 | 5118 | 0 | 0 | 228 | |
| SQA006854 | 3B (VPg) | 5119 | 5181 | 0 | 0 | 63 | |
| SQA006855 | protease 3C | 5182 | 5730 | 0 | 0 | 549 | |
| SQA006856 | 3D | 5731 | 7110 | 0 | 0 | 1380 | |
| SQA006857 | 5'UTR | 1 | 618 | 0 | 0 | 618 | |
| SQA006858 | CDS | 619 | 7113 | 0 | 0 | 6495 | |
| SQA006859 | VP4/2 | 619 | 1053 | 0 | 0 | 435 | |
| SQA006860 | genome | 1 | 7152 | 0 | 0 | 7152 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001880 | protease 3C | 1522 | 1704 | 0 | 0 | 183 | |
| SPA001881 | 3D | 1705 | 2164 | 0 | 0 | 460 | |
| SPA001882 | 3B (VPg) | 1501 | 1521 | 0 | 0 | 21 | |
| SPA001883 | 3A (P3-A) | 1425 | 1500 | 0 | 0 | 76 | |
| SPA001884 | 2C (P2-C) | 1104 | 1424 | 0 | 0 | 321 | |
| SPA001885 | 2B (P2-B) | 1009 | 1103 | 0 | 0 | 95 | |
| SPA001886 | 2A (P2-A) | 867 | 1008 | 0 | 0 | 142 | |
| SPA001887 | 1D (VP1) | 575 | 866 | 0 | 0 | 292 | |
| SPA001888 | 1C (VP3) | 337 | 574 | 0 | 0 | 238 | |
| SPA001889 | 1B (VP2) | 70 | 336 | 0 | 0 | 267 | |
| SPA001890 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001891 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001892 | CDS | 1 | 2164 | 0 | 0 | 2164 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |