| RVdb StrainID | ANC07744 | GenBank Accession | GQ415052.1 |
| Species | RVA | Sequence Length | 7129 nt |
| Serotype | 101 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Human rhinovirus A isolate hrv-A101-v1, complete genome | GenBank Submission Date | 2010-01-13 |
| Strain Name | hrv-A101-v1 | Sampling Date | 2008-08 |
| Sampling Country | USA | Sampling location | Maryland, Baltimore |
| Isolation Source | nasal lavage | NCBI Taxon ID | 147711 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA006796 | 1A (VP4) | 616 | 822 | 0 | 0 | 207 | |
| SQA006797 | 1B (VP2) | 823 | 1605 | 0 | 0 | 783 | |
| SQA006798 | 1C (VP3) | 1606 | 2319 | 0 | 0 | 714 | |
| SQA006799 | 1D (VP1) | 2320 | 3186 | 0 | 0 | 867 | |
| SQA006800 | 2A (P2-A) | 3187 | 3615 | 0 | 0 | 429 | |
| SQA006801 | 2B (P2-B) | 3616 | 3900 | 0 | 0 | 285 | |
| SQA006802 | 2C (P2-C) | 3901 | 4863 | 0 | 0 | 963 | |
| SQA006803 | 3'UTR | 7090 | 7129 | 0 | 0 | 40 | |
| SQA006804 | 3A (P3-A) | 4864 | 5097 | 0 | 0 | 234 | |
| SQA006805 | 3B (VPg) | 5098 | 5160 | 0 | 0 | 63 | |
| SQA006806 | protease 3C | 5161 | 5709 | 0 | 0 | 549 | |
| SQA006807 | 3D | 5710 | 7086 | 0 | 0 | 1377 | |
| SQA006808 | 5'UTR | 1 | 615 | 0 | 0 | 615 | |
| SQA006809 | CDS | 616 | 7089 | 0 | 0 | 6474 | |
| SQA006810 | VP4/2 | 616 | 1050 | 0 | 0 | 435 | |
| SQA006811 | genome | 1 | 7129 | 0 | 0 | 7129 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA002012 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA002013 | 3D | 1699 | 2157 | 0 | 0 | 459 | |
| SPA002014 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 | |
| SPA002015 | 3A (P3-A) | 1417 | 1494 | 0 | 0 | 78 | |
| SPA002016 | 2C (P2-C) | 1096 | 1416 | 0 | 0 | 321 | |
| SPA002017 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA002018 | 2A (P2-A) | 858 | 1000 | 0 | 0 | 143 | |
| SPA002019 | 1D (VP1) | 569 | 857 | 0 | 0 | 289 | |
| SPA002020 | 1C (VP3) | 331 | 568 | 0 | 0 | 238 | |
| SPA002021 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
| SPA002022 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA002023 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA002024 | CDS | 1 | 2157 | 0 | 0 | 2157 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19936613 | Full-genome sequence and analysis of a novel human rhinovirus strain within a divergent HRV-A clade. | 2010 | Arch Virol | View More |