| RVdb StrainID | ANC06799 | GenBank Accession | JX074049.1 |
| Species | RVA | Sequence Length | 6562 nt |
| Serotype | 76 Checked by RVdb | Serotype (GenBank) | 76 |
| Definition | Human rhinovirus A strain HRV-A76_p1194_sR844_2008 polyprotein gene, partial cds | GenBank Submission Date | 2017-01-25 |
| Strain Name | HRV-A76_p1194_sR844_2008 | Sampling Date | 2008 |
| Sampling Country | USA | Sampling location | Madison, WI |
| Isolation Source | -N/A- | NCBI Taxon ID | 147711 |
| Sequencing Technology | Illumina | Assembly Method | Celera 7.0 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA006067 | 1A (VP4) | 671 | 877 | 0 | 0 | 207 | |
| SQA006068 | 1B (VP2) | 878 | 1663 | 0 | 0 | 786 | |
| SQA006069 | 1C (VP3) | 1664 | 2377 | 0 | 0 | 714 | |
| SQA006070 | 1D (VP1) | 2378 | 3235 | 0 | 0 | 858 | |
| SQA006071 | 2A (P2-A) | 3236 | 3661 | 0 | 0 | 426 | |
| SQA006072 | 2B (P2-B) | 3662 | 3946 | 0 | 0 | 285 | |
| SQA006073 | 2C (P2-C) | 3947 | 4912 | 0 | 0 | 966 | |
| SQA006074 | 3A (P3-A) | 4913 | 5143 | 0 | 0 | 231 | |
| SQA006075 | 3B (VPg) | 5144 | 5206 | 0 | 0 | 63 | |
| SQA006076 | protease 3C | 5207 | 5755 | 0 | 0 | 549 | |
| SQA006077 | 3D | 5756 | 6562 | 0 | 1 | 807 | |
| SQA006078 | 5'UTR | 54 | 670 | 0 | 0 | 617 | |
| SQA006079 | CDS | 671 | 6562 | 0 | 1 | 5892 | |
| SQA006080 | VP4/2 | 671 | 1105 | 0 | 0 | 435 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA005077 | protease 3C | 1513 | 1695 | 0 | 0 | 183 | |
| SPA005078 | 3D | 1696 | 1964 | 0 | 1 | 269 | |
| SPA005079 | 3B (VPg) | 1492 | 1512 | 0 | 0 | 21 | |
| SPA005080 | 3A (P3-A) | 1415 | 1491 | 0 | 0 | 77 | |
| SPA005081 | 2C (P2-C) | 1093 | 1414 | 0 | 0 | 322 | |
| SPA005082 | 2B (P2-B) | 998 | 1092 | 0 | 0 | 95 | |
| SPA005083 | 2A (P2-A) | 856 | 997 | 0 | 0 | 142 | |
| SPA005084 | 1D (VP1) | 570 | 855 | 0 | 0 | 286 | |
| SPA005085 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA005086 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA005087 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA005088 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA005089 | CDS | 1 | 1964 | 0 | 0 | 1964 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675855 | Genome sequences of rhinovirus a isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |