| RVdb StrainID | CNS00033 | GenBank Accession | ON311161.1 |
| Species | RVC | Sequence Length | 7006 nt |
| Serotype | 33 Checked by RVdb | Serotype (GenBank) | 33 |
| Definition | Rhinovirus C strain C33_1 polyprotein gene, complete cds | GenBank Submission Date | 2022-11-06 |
| Strain Name | C33_1 | Sampling Date | 2021-03-08 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 463676 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC013509 | 1A (VP4) | 521 | 721 | 0 | 0 | 201 | |
| SQC013510 | 1B (VP2) | 722 | 1507 | 0 | 0 | 786 | |
| SQC013511 | 1C (VP3) | 1508 | 2218 | 0 | 0 | 711 | |
| SQC013512 | 1D (VP1) | 2219 | 3046 | 0 | 0 | 828 | |
| SQC013513 | 2A (P2-A) | 3047 | 3472 | 0 | 0 | 426 | |
| SQC013514 | 2B (P2-B) | 3473 | 3769 | 0 | 0 | 297 | |
| SQC013515 | 2C (P2-C) | 3770 | 4747 | 0 | 0 | 978 | |
| SQC013516 | 3'UTR | 6971 | 0 | 0 | 1 | 35 | |
| SQC013517 | 3A (P3-A) | 4748 | 4972 | 0 | 0 | 225 | |
| SQC013518 | 3B (VPg) | 4973 | 5038 | 0 | 0 | 66 | |
| SQC013519 | 3D | 5588 | 6967 | 0 | 0 | 1380 | |
| SQC013520 | 5'UTR | 0 | 520 | 1 | 0 | 520 | |
| SQC013521 | CDS | 521 | 6970 | 0 | 0 | 6450 | |
| SQC013522 | protease 3C | 5039 | 5587 | 0 | 0 | 549 | |
| SQC013523 | VP4/2 | 521 | 951 | 0 | 0 | 431 | |
| SQC013524 | genome | 1 | 7006 | 1 | 1 | 7006 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC017510 | CDS | 1 | 2149 | 0 | 0 | 2149 | |
| SPC017511 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC017512 | 3D | 1690 | 2149 | 0 | 0 | 460 | |
| SPC017513 | 2C (P2-C) | 1084 | 1409 | 0 | 0 | 326 | |
| SPC017514 | 1D (VP1) | 567 | 842 | 0 | 0 | 276 | |
| SPC017515 | 1B (VP2) | 68 | 329 | 0 | 0 | 262 | |
| SPC017516 | 1C (VP3) | 330 | 566 | 0 | 0 | 237 | |
| SPC017517 | protease 3C | 1507 | 1689 | 0 | 0 | 183 | |
| SPC017518 | 2A (P2-A) | 843 | 984 | 0 | 0 | 142 | |
| SPC017519 | 2B (P2-B) | 985 | 1083 | 0 | 0 | 99 | |
| SPC017520 | 3A (P3-A) | 1410 | 1484 | 0 | 0 | 75 | |
| SPC017521 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC017522 | 3B (VPg) | 1485 | 1506 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |