RVdb StrainID | CNP01167 | GenBank Accession | MW622724.1 |
Species | RVC | Sequence Length | 372 nt |
Serotype | -N/A- | Serotype (GenBank) | -N/A- |
Definition | Rhinovirus C isolate KEN/Kilifi/HRV/5598/2011-09-03 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
Strain Name | KEN/Kilifi/HRV/5598/2011-09-03 | Sampling Date | 2011-09-03 |
Sampling Country | Kenya | Sampling location | coast of Kenya, Kilifi County |
Isolation Source | -N/A- | NCBI Taxon ID | 463676 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | -N/A- |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQC010443 | 1A (VP4) | 1 | 201 | 0 | 0 | 201 | |
SQC010444 | CDS | 1 | 0 | 0 | 1 | 372 | |
SQC010445 | VP4/2 | 1 | 0 | 0 | 1 | 372 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPC016285 | CDS | 1 | 124 | 0 | 1 | 124 | |
SPC016286 | VP4/2 | 1 | 124 | 0 | 1 | 124 | |
SPC016287 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
34988244 | Trends and Intensity of Rhinovirus Invasions in Kilifi, Coastal Kenya, Over a 12-Year Period, 2007-2018. | 2021 | Open Forum Infect Dis | View More |