| RVdb StrainID | ANP00042 | GenBank Accession | ON311253.1 |
| Species | RVA | Sequence Length | 7008 nt |
| Serotype | 23 Checked by RVdb | Serotype (GenBank) | 23 |
| Definition | Rhinovirus A23 strain A23_1 polyprotein gene, complete cds | GenBank Submission Date | 2022-07-19 |
| Strain Name | A23_1 | Sampling Date | 2020-07-31 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 12135 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA015820 | 1A (VP4) | 524 | 730 | 0 | 0 | 207 | |
| SQA015821 | 1B (VP2) | 731 | 1513 | 0 | 0 | 783 | |
| SQA015822 | 1C (VP3) | 1514 | 2221 | 0 | 0 | 708 | |
| SQA015823 | 1D (VP1) | 2222 | 3070 | 0 | 0 | 849 | |
| SQA015824 | 2A (P2-A) | 3071 | 3496 | 0 | 0 | 426 | |
| SQA015825 | 2B (P2-B) | 3497 | 3781 | 0 | 0 | 285 | |
| SQA015826 | 2C (P2-C) | 3782 | 4754 | 0 | 0 | 973 | |
| SQA015827 | 3'UTR | 6974 | 7008 | 0 | 1 | 35 | |
| SQA015828 | 3A (P3-A) | 4755 | 4978 | 0 | 0 | 224 | |
| SQA015829 | 3B (VPg) | 4979 | 5041 | 0 | 0 | 63 | |
| SQA015830 | protease 3C | 5042 | 5590 | 0 | 0 | 549 | |
| SQA015831 | 3D | 5591 | 6970 | 0 | 0 | 1380 | |
| SQA015832 | 5'UTR | 1 | 523 | 1 | 0 | 523 | |
| SQA015833 | CDS | 524 | 6973 | 0 | 0 | 6450 | |
| SQA015834 | VP4/2 | 524 | 958 | 0 | 0 | 435 | |
| SQA015835 | genome | 1 | 7008 | 1 | 1 | 7008 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA030085 | protease 3C | 1507 | 1689 | 0 | 0 | 183 | |
| SPA030086 | 3D | 1690 | 2145 | 0 | 0 | 456 | |
| SPA030087 | 3B (VPg) | 1486 | 1506 | 0 | 0 | 21 | |
| SPA030088 | 3A (P3-A) | 1409 | 1485 | 0 | 0 | 77 | |
| SPA030089 | 2C (P2-C) | 1087 | 1408 | 0 | 0 | 322 | |
| SPA030090 | 2B (P2-B) | 992 | 1086 | 0 | 0 | 95 | |
| SPA030091 | 2A (P2-A) | 850 | 991 | 0 | 0 | 142 | |
| SPA030092 | 1D (VP1) | 567 | 849 | 0 | 0 | 283 | |
| SPA030093 | 1C (VP3) | 331 | 566 | 0 | 0 | 236 | |
| SPA030094 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
| SPA030095 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA030096 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA030097 | CDS | 1 | 2149 | 0 | 0 | 2149 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |