| RVdb StrainID | ANC05834 | GenBank Accession | KM576767.1 |
| Species | RVA | Sequence Length | 7142 nt |
| Serotype | 21 Checked by RVdb | Serotype (GenBank) | 21 |
| Definition | Human rhinovirus A21 isolate pumch13371/2013 polyprotein gene, complete cds | GenBank Submission Date | 2017-03-01 |
| Strain Name | pumch13371/2013 | Sampling Date | 2013-04-05 |
| Sampling Country | China | Sampling location | Beijing |
| Isolation Source | nasal and throat swab | NCBI Taxon ID | 44128 |
| Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA005534 | 1A (VP4) | 594 | 800 | 0 | 0 | 207 | |
| SQA005535 | 1B (VP2) | 801 | 1581 | 0 | 0 | 781 | |
| SQA005536 | 1C (VP3) | 1582 | 2303 | 0 | 0 | 722 | |
| SQA005537 | 1D (VP1) | 2304 | 3164 | 0 | 0 | 861 | |
| SQA005538 | 2A (P2-A) | 3165 | 3590 | 0 | 0 | 426 | |
| SQA005539 | 2B (P2-B) | 3591 | 3875 | 0 | 0 | 285 | |
| SQA005540 | 2C (P2-C) | 3876 | 4841 | 0 | 0 | 966 | |
| SQA005541 | 3'UTR | 7068 | 7113 | 0 | 0 | 46 | |
| SQA005542 | 3A (P3-A) | 4842 | 5072 | 0 | 0 | 231 | |
| SQA005543 | 3B (VPg) | 5073 | 5135 | 0 | 0 | 63 | |
| SQA005544 | protease 3C | 5136 | 5684 | 0 | 0 | 549 | |
| SQA005545 | 3D | 5685 | 7064 | 0 | 0 | 1380 | |
| SQA005546 | 5'UTR | 1 | 593 | 1 | 0 | 593 | |
| SQA005547 | CDS | 594 | 7067 | 0 | 0 | 6474 | |
| SQA005548 | VP4/2 | 594 | 1028 | 0 | 0 | 435 | |
| SQA005549 | genome | 1 | 7142 | 1 | 0 | 7142 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA007789 | protease 3C | 1515 | 1697 | 0 | 0 | 183 | |
| SPA007790 | 3D | 1698 | 2153 | 0 | 0 | 456 | |
| SPA007791 | 3B (VPg) | 1494 | 1514 | 0 | 0 | 21 | |
| SPA007792 | 3A (P3-A) | 1417 | 1493 | 0 | 0 | 77 | |
| SPA007793 | 2C (P2-C) | 1095 | 1416 | 0 | 0 | 322 | |
| SPA007794 | 2B (P2-B) | 1000 | 1094 | 0 | 0 | 95 | |
| SPA007795 | 2A (P2-A) | 858 | 999 | 0 | 0 | 142 | |
| SPA007796 | 1D (VP1) | 571 | 857 | 0 | 0 | 287 | |
| SPA007797 | 1C (VP3) | 330 | 570 | 0 | 0 | 241 | |
| SPA007798 | 1B (VP2) | 70 | 329 | 0 | 0 | 260 | |
| SPA007799 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA007800 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA007801 | CDS | 1 | 2157 | 0 | 0 | 2157 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 28128353 | Genotyping of human rhinovirus in adult patients with acute respiratory infections identified predominant infections of genotype A21. | 2017 | Sci Rep | View More |