RVdb StrainID | ANC03444 | GenBank Accession | MH459712.1 |
Species | RVA | Sequence Length | 336 nt |
Serotype | -N/A- | Serotype (GenBank) | -N/A- |
Definition | Rhinovirus A isolate KEN/3175/Apr-2016 polyprotein gene, partial cds | GenBank Submission Date | 2018-11-03 |
Strain Name | KEN/3175/Apr-2016 | Sampling Date | 2016-04-12 |
Sampling Country | Kenya | Sampling location | Kilifi |
Isolation Source | -N/A- | NCBI Taxon ID | 147711 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | Sequencher v. v.5.0 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA004196 | 1A (VP4) | 1 | 207 | 0 | 0 | 207 | |
SQA004197 | CDS | 1 | 336 | 0 | 1 | 336 | |
SQA004198 | VP4/2 | 1 | 336 | 0 | 1 | 336 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA013498 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA013499 | CDS | 1 | 112 | 0 | 0 | 112 | |
SPA013500 | VP4/2 | 1 | 112 | 0 | 1 | 112 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
30483602 | Human rhinovirus spatial-temporal epidemiology in rural coastal Kenya, 2015-2016, observed through outpatient surveillance. | 2018 | Wellcome Open Res | View More |