RVdb-Rhinovirus Database

Basic information

Title	Detection of human rhinovirus C in children with acute lower respiratory tract infections in South Korea.
Author	Han, Tae-Hee; Chung, Ju-Young; Hwang, Eung-Soo; Koo, Ja-Wook
Journal	Arch Virol	Publication Year/Month	2009
PMID	19415451	PMCID	PMC7086646
Affiliation	1.Department of Diagnostic Laboratory Medicine, Sanggyepaik Hospital, College of Medicine, Inje University, 761-1 Nowon-Gu, Seoul, Korea.

Abstract

Recently, HRV-C was identified as a new species of HRV, but its spectrum of clinical disease is still not clear. The purpose of this study was to investigate the molecular epidemiology of HRVs in children with acute lower respiratory tract infections (LRTIs). A total of 54 HRV-positive samples that were negative for other respiratory viruses were sequenced. HRV-A was detected in 33, HRV-B in 4, and HRV-C in 17 of these samples. All HRV-C-positive patients showed favorable clinical outcomes. We confirmed the presence of HRV-C in children with LRTIs, but its association with clinical severity is not clear.

MeSH terms

Picornaviridae Infections/*epidemiology/*virology

Respiratory Tract Infections/*epidemiology/*virology

Rhinovirus/classification/genetics/*isolation & purification

Adolescent

Child

Child, Preschool

Cluster Analysis

Female

Genotype

Humans

Infant

Korea/epidemiology

Male

Molecular Epidemiology

Molecular Sequence Data

Phylogeny

RNA, Viral/genetics

Sequence Analysis, DNA

Treatment Outcome

Related RV Strain

StrainID	RV Species	Serotype	Length(nt)	Country	Year	Strain Name
ANC07874	A	None	447	South Korea	2006	KR2320
ANC07879	A	None	447	South Korea	2006	KR2264
ANC07884	A	None	447	South Korea	2006	KR2217
ANC07889	A	None	447	South Korea	2006	KR2072
ANC07894	A	None	447	South Korea	2006	KR1866
ANM07875	A	None	447	South Korea	2006	KR2301
ANM07880	A	None	447	South Korea	2006	KR2261
ANM07885	A	None	447	South Korea	2006	KR2206
ANM07890	A	None	447	South Korea	2006	KR2057
ANM07895	A	None	447	South Korea	2006	KR1733
ANP07877	A	None	447	South Korea	2006	KR2288
ANP07882	A	None	447	South Korea	2006	KR2220
ANP07887	A	None	447	South Korea	2006	KR2174
ANP07892	A	None	447	South Korea	2006	KR1885
ANS07873	A	None	447	South Korea	2006	KR2390
ANS07878	A	None	447	South Korea	2006	KR2271
ANS07883	A	None	447	South Korea	2006	KR2218
ANS07888	A	None	447	South Korea	2006	KR2098
ANS07893	A	None	447	South Korea	2006	KR1884
ANZ07876	A	None	447	South Korea	2006	KR2313
ANZ07881	A	None	447	South Korea	2006	KR2244
ANZ07886	A	None	447	South Korea	2006	KR2184
ANZ07891	A	None	447	South Korea	2006	KR1956
BNC01499	B	None	447	South Korea	2006	KR2285
BNM01500	B	None	447	South Korea	2006	KR2275
BNS01498	B	None	447	South Korea	2006	KR2629
CNC05859	C	None	441	South Korea	2006	KR2425
CNC05864	C	None	441	South Korea	2006	KR1945
CNM05860	C	None	441	South Korea	2006	KR2315
CNM05865	C	None	441	South Korea	2006	KR1873
CNP05862	C	None	441	South Korea	2006	KR2031
CNP05867	C	None	441	South Korea	2006	KR1768
CNS05858	C	None	441	South Korea	2006	KR2543
CNS05863	C	None	441	South Korea	2006	KR1937
CNZ05861	C	None	441	South Korea	2006	KR2172
CNZ05866	C	None	441	South Korea	2006	KR1868
UNS01392	Unclassified	None	286	South Korea	2006	KR1768
UNS01393	Unclassified	None	287	South Korea	2006	KR1773
UNS01394	Unclassified	None	281	South Korea	2006	KR1866
UNS01395	Unclassified	None	289	South Korea	2006	KR1869
UNS01396	Unclassified	None	288	South Korea	2006	KR1885
UNS01397	Unclassified	None	286	South Korea	2006	KR1902
UNS01398	Unclassified	None	283	South Korea	2006	KR1936
UNS01399	Unclassified	None	290	South Korea	2006	KR1937
UNS01400	Unclassified	None	284	South Korea	2006	KR1956
UNS01401	Unclassified	None	285	South Korea	2006	KR1961
UNS01402	Unclassified	None	286	South Korea	2006	KR1979
UNS01403	Unclassified	None	288	South Korea	2006	KR2031
UNS01404	Unclassified	None	285	South Korea	2006	KR2063
UNS01405	Unclassified	None	285	South Korea	2006	KR2072
UNS01406	Unclassified	None	284	South Korea	2006	KR2098
UNS01407	Unclassified	None	287	South Korea	2006	KR2113
UNS01408	Unclassified	None	286	South Korea	2006	KR2146
UNS01409	Unclassified	None	286	South Korea	2006	KR2172
UNS01410	Unclassified	None	287	South Korea	2006	KR2174
UNS01411	Unclassified	None	283	South Korea	2006	KR2184
UNS01412	Unclassified	None	287	South Korea	2006	KR2206
UNS01413	Unclassified	None	287	South Korea	2006	KR2217
UNS01414	Unclassified	None	289	South Korea	2006	KR2218
UNS01415	Unclassified	None	283	South Korea	2006	KR2220
UNS01416	Unclassified	None	283	South Korea	2006	KR2244
UNS01417	Unclassified	None	287	South Korea	2006	KR2271
UNS01418	Unclassified	None	283	South Korea	2006	KR2264
UNS01419	Unclassified	None	287	South Korea	2006	KR2275
UNS01420	Unclassified	None	287	South Korea	2006	KR2285
UNS01421	Unclassified	None	288	South Korea	2006	KR2288
UNS01422	Unclassified	None	283	South Korea	2006	KR2311
UNS01423	Unclassified	None	287	South Korea	2006	KR2390
UNS01424	Unclassified	None	288	South Korea	2006	KR2394
UNS01425	Unclassified	None	286	South Korea	2006	KR2398
UNS01426	Unclassified	None	283	South Korea	2006	KR2261
UNS01427	Unclassified	None	284	South Korea	2006	KR2316
UNS01428	Unclassified	None	284	South Korea	2006	KR2320
UNS01429	Unclassified	None	284	South Korea	2006	KR2484
UNS01430	Unclassified	None	285	South Korea	2006	KR2606
UNS01431	Unclassified	None	289	South Korea	2006	KR1868
UNS01432	Unclassified	None	287	South Korea	2006	KR1873
UNS01433	Unclassified	None	288	South Korea	2006	KR1884
UNS01434	Unclassified	None	286	South Korea	2006	KR1945
UNS01435	Unclassified	None	285	South Korea	2006	KR2057
UNS01436	Unclassified	None	286	South Korea	2006	KR2126
UNS01437	Unclassified	None	286	South Korea	2006	KR2155
UNS01438	Unclassified	None	287	South Korea	2006	KR2301
UNS01439	Unclassified	None	292	South Korea	2006	KR2315
UNS01440	Unclassified	None	286	South Korea	2006	KR2425
UNS01441	Unclassified	None	287	South Korea	2006	KR2543
UNS01442	Unclassified	None	287	South Korea	2006	KR2569
UNS01443	Unclassified	None	282	South Korea	2006	KR2581
UNS01444	Unclassified	None	281	South Korea	2006	KR2629
UNS01445	Unclassified	None	283	South Korea	2006	KR2313

Publication