PMID Title Journal Publication Year Author View in RVdb
24265599 Whole blood gene expression profiles to assess pathogenesis and disease severity in infants with respiratory syncytial virus infection. PLoS Med 2013 Mejias A;Dimo B;Suarez NM;Garcia C;Suarez-Arrabal MC;Jartti T;Blankenship D;Jordan-Villegas A;Ardura MI;Xu Z;Banchereau J;Chaussabel D;Ramilo O View More
24475887 dsRNA-induced changes in gene expression profiles of primary nasal and bronchial epithelial cells from patients with asthma, rhinitis and controls. Respir Res 2014 Wagener AH;Zwinderman AH;Luiten S;Fokkens WJ;Bel EH;Sterk PJ;van Drunen CM View More
24684577 Distinct regulation of tonsillar immune response in virus infection. Allergy 2014 Jartti T;Palomares O;Waris M;Tastan O;Nieminen R;Puhakka T;Ruckert B;Aab A;Vuorinen T;Allander T;Vahlberg T;Ruuskanen O;Akdis M;Akdis CA View More
24784476 MicroRNAs and the immune response to respiratory virus infections. Expert Rev Clin Immunol 2014 Globinska A;Pawelczyk M;Kowalski ML View More
25847975 CCL7 and IRF-7 Mediate Hallmark Inflammatory and IFN Responses following Rhinovirus 1B Infection. J Immunol 2015 Girkin J;Hatchwell L;Foster P;Johnston SL;Bartlett N;Collison A;Mattes J View More
25874939 Host genetic variation influences gene expression response to rhinovirus infection. PLoS Genet 2015 Caliskan M;Baker SW;Gilad Y;Ober C View More
26070066 Host Transcriptional Response to Influenza and Other Acute Respiratory Viral Infections--A Prospective Cohort Study. PLoS Pathog 2015 Zhai Y;Franco LM;Atmar RL;Quarles JM;Arden N;Bucasas KL;Wells JM;Nino D;Wang X;Zapata GE;Shaw CA;Belmont JW;Couch RB View More
26193668 Gene Expression Profiles Link Respiratory Viral Infection, Platelet Response to Aspirin, and Acute Myocardial Infarction. PLoS One 2015 Rose JJ;Voora D;Cyr DD;Lucas JE;Zaas AK;Woods CW;Newby LK;Kraus WE;Ginsburg GS View More
27833115 Transcriptome assists prognosis of disease severity in respiratory syncytial virus infected infants. Sci Rep 2016 Jong VL;Ahout IM;van den Ham HJ;Jans J;Zaaraoui-Boutahar F;Zomer A;Simonetti E;Bijl MA;Brand HK;van IJcken WF;de Jonge MI;Fraaij PL;de Groot R;Osterhaus AD;Eijkemans MJ;Ferwerda G;Andeweg AC View More
28273165 Transcriptome profiling of influenza A virus-infected lung epithelial (A549) cells with lariciresinol-4-beta-D-glucopyranoside treatment. PLoS One 2017 Zhou B;Li J;Liang X;Yang Z;Jiang Z View More
29016970 A genome-by-environment interaction classifier for precision medicine: personal transcriptome response to rhinovirus identifies children prone to asthma exacerbations. J Am Med Inform Assoc 2017 Gardeux V;Berghout J;Achour I;Schissler AG;Li Q;Kenost C;Li J;Shang Y;Bosco A;Saner D;Halonen MJ;Jackson DJ;Li H;Martinez FD;Lussier YA View More
29486764 Impaired type I interferon regulation in the blood transcriptome of recurrent asthma exacerbations. BMC Med Genomics 2018 Gomez JL;Diaz MP;Nino G;Britto CJ View More
29521598 Rhinovirus infection induces distinct transcriptome profiles in polarized human macrophages. Physiol Genomics 2018 Rajput C;Walsh MP;Eder BN;Metitiri EE;Popova AP;Hershenson MB View More
29729188 Atopic asthma after rhinovirus-induced wheezing is associated with DNA methylation change in the SMAD3 gene promoter. Allergy 2018 Lund RJ;Osmala M;Malonzo M;Lukkarinen M;Leino A;Salmi J;Vuorikoski S;Turunen R;Vuorinen T;Akdis C;Lahdesmaki H;Lahesmaa R;Jartti T View More
30339221 Host Gene Expression in Nose and Blood for the Diagnosis of Viral Respiratory Infection. J Infect Dis 2019 Yu J;Peterson DR;Baran AM;Bhattacharya S;Wylie TN;Falsey AR;Mariani TJ;Storch GA View More
30342586 Molecular Endotypes Contribute to the Heterogeneity of Asthma. Immunol Allergy Clin North Am 2018 Gelfand EW;Schedel M View More
30745463 Upper Airway Cell Transcriptomics Identify a Major New Immunological Phenotype with Strong Clinical Correlates in Young Children with Acute Wheezing. J Immunol 2019 Khoo SK;Read J;Franks K;Zhang G;Bizzintino J;Coleman L;McCrae C;Oberg L;Troy NM;Prastanti F;Everard J;Oo S;Borland ML;Maciewicz RA;Le Souef PN;Laing IA;Bosco A View More
30962590 Transcriptome networks identify mechanisms of viral and nonviral asthma exacerbations in children. Nat Immunol 2019 Altman MC;Gill MA;Whalen E;Babineau DC;Shao B;Liu AH;Jepson B;Gruchalla RS;O'Connor GT;Pongracic JA;Kercsmar CM;Khurana Hershey GK;Zoratti EM;Johnson CC;Teach SJ;Kattan M;Bacharier LB;Beigelman A;Sigelman SM;Presnell S;Gern JE;Gergen PJ;Wheatley LM;Togias A;Busse WW;Jackson DJ View More
31067687 Transcriptomic Analysis Reveals Priming of The Host Antiviral Interferon Signaling Pathway by Bronchobini((R)) Resulting in Balanced Immune Response to Rhinovirus Infection in Mouse Lung Tissue Slices. Int J Mol Sci 2019 Reamon-Buettner SM;Niehof M;Hirth N;Danov O;Obernolte H;Braun A;Warnecke J;Sewald K;Wronski S View More
31231515 A curated transcriptome dataset collection to investigate the blood transcriptional response to viral respiratory tract infection and vaccination. F1000Res 2019 Bougarn S;Boughorbel S;Chaussabel D;Marr N View More
32155831 A Meta-Analysis of Multiple Whole Blood Gene Expression Data Unveils a Diagnostic Host-Response Transcript Signature for Respiratory Syncytial Virus. Int J Mol Sci 2020 Barral-Arca R;Gomez-Carballa A;Cebey-Lopez M;Bello X;Martinon-Torres F;Salas A View More
32765492 Rhinovirus Infection Drives Complex Host Airway Molecular Responses in Children With Cystic Fibrosis. Front Immunol 2020 Ling KM;Garratt LW;Gill EE;Lee AHY;Agudelo-Romero P;Sutanto EN;Iosifidis T;Rosenow T;Turvey SE;Lassmann T;Hancock REW;Kicic A;Stick SM View More
33197460 Integrated-omics endotyping of infants with rhinovirus bronchiolitis and risk of childhood asthma. J Allergy Clin Immunol 2021 Raita Y;Camargo CA Jr;Bochkov YA;Celedon JC;Gern JE;Mansbach JM;Rhee EP;Freishtat RJ;Hasegawa K View More
33432184 A novel ACE2 isoform is expressed in human respiratory epithelia and is upregulated in response to interferons and RNA respiratory virus infection. Nat Genet 2021 Blume C;Jackson CL;Spalluto CM;Legebeke J;Nazlamova L;Conforti F;Perotin JM;Frank M;Butler J;Crispin M;Coles J;Thompson J;Ridley RA;Dean LSN;Loxham M;Reikine S;Azim A;Tariq K;Johnston DA;Skipp PJ;Djukanovic R;Baralle D;McCormick CJ;Davies DE;Lucas JS;Wheway G;Mennella V View More
33712279 Cockroach-induced IL9, IL13, and IL31 expression and the development of allergic asthma in urban children. J Allergy Clin Immunol 2021 LeBeau P;Lockhart A;Togias A;Sandel MT;Gereige JD;Bacharier L;Lovinsky-Desir S;Wood RA;James R;Busse WW;Gern JE;Altman MC View More
34127671 Integrated omics endotyping of infants with respiratory syncytial virus bronchiolitis and risk of childhood asthma. Nat Commun 2021 Raita Y;Perez-Losada M;Freishtat RJ;Harmon B;Mansbach JM;Piedra PA;Zhu Z;Camargo CA;Hasegawa K View More
34160242 Rhinovirus Reduces the Severity of Subsequent Respiratory Viral Infections by Interferon-Dependent and -Independent Mechanisms. mSphere 2021 Van Leuven JT;Gonzalez AJ;Ijezie EC;Wixom AQ;Clary JL;Naranjo MN;Ridenhour BJ;Miller CR;Miura TA View More
34322716 The role of CDHR3 in susceptibility to otitis media. J Mol Med (Berl) 2021 Hirsch SD;Elling CL;Bootpetch TC;Scholes MA;Hafren L;Streubel SO;Pine HS;Wine TM;Szeremeta W;Prager JD;Einarsdottir E;Yousaf A;Baschal EE;Rehman S;Bamshad MJ;Nickerson DA;Riazuddin S;Leal SM;Ahmed ZM;Yoon PJ;Kere J;Chan KH;Mattila PS;Friedman NR;Chonmaitree T;Frank DN;Ryan AF;Santos-Cortez RLP View More
34376762 Comparative transcriptome analyses reveal genes associated with SARS-CoV-2 infection of human lung epithelial cells. Sci Rep 2021 Chandrashekar DS;Athar M;Manne U;Varambally S View More
34433834 Early prognosis of respiratory virus shedding in humans. Sci Rep 2021 Aminian M;Ghosh T;Peterson A;Rasmussen AL;Stiverson S;Sharma K;Kirby M View More
34777354 The Host Response to Viral Infections Reveals Common and Virus-Specific Signatures in the Peripheral Blood. Front Immunol 2021 Tsalik EL;Fiorino C;Aqeel A;Liu Y;Henao R;Ko ER;Burke TW;Reller ME;Bodinayake CK;Nagahawatte A;Arachchi WK;Devasiri V;Kurukulasooriya R;McClain MT;Woods CW;Ginsburg GS;Tillekeratne LG;Schughart K View More
34782458 Maternal cannabis use is associated with suppression of immune gene networks in placenta and increased anxiety phenotypes in offspring. Proc Natl Acad Sci U S A 2021 Rompala G;Nomura Y;Hurd YL View More
35149044 Seasonal airway microbiome and transcriptome interactions promote childhood asthma exacerbations. J Allergy Clin Immunol 2022 McCauley KE;Flynn K;Calatroni A;DiMassa V;LaMere B;Fadrosh DW;Lynch KV;Gill MA;Pongracic JA;Khurana Hershey GK;Kercsmar CM;Liu AH;Johnson CC;Kim H;Kattan M;O'Connor GT;Bacharier LB;Teach SJ;Gergen PJ;Wheatley LM;Togias A;LeBeau P;Presnell S;Boushey HA;Busse WW;Gern JE;Jackson DJ;Altman MC;Lynch SV View More
35274302 Transcriptomics of rhinovirus persistence reveals sustained expression of RIG-I and interferon-stimulated genes in nasal epithelial cells in vitro. Allergy 2022 Ong HH;Andiappan AK;Duan K;Lum J;Liu J;Tan KS;Howland S;Lee B;Ong YK;Thong M;Chow VT;Wang DY View More
35504488 Mapping molecular gene signatures mediated by SARS-COV-2 and large-scale and genome-wide transcriptomics comparative analysis among respiratory viruses of medical importance. Mol Cell Probes 2022 Smith T;Rohaim MA;Munir M View More
36528702 Pathway expression analysis. Sci Rep 2022 Mankovich N;Kehoe E;Peterson A;Kirby M View More