PMID Title Journal Publication Year Author View in RVdb
23801660 Bacteria in the nose of young adults during wellness and rhinovirus colds: detection by culture and microarray methods in 100 nasal lavage specimens. Int Forum Allergy Rhinol 2013 Allen EK;Pitkaranta A;Maki M;Hendley JO;Laakso S;Sale MM;Winther B View More
23992479 Outgrowth of the bacterial airway microbiome after rhinovirus exacerbation of chronic obstructive pulmonary disease. Am J Respir Crit Care Med 2013 Molyneaux PL;Mallia P;Cox MJ;Footitt J;Willis-Owen SA;Homola D;Trujillo-Torralbo MB;Elkin S;Kon OM;Cookson WO;Moffatt MF;Johnston SL View More
24091724 Is asthma an infectious disease? New evidence. Curr Allergy Asthma Rep 2013 Atkinson TP View More
24236585 The lung microbiome and viral-induced exacerbations of chronic obstructive pulmonary disease: new observations, novel approaches. Am J Respir Crit Care Med 2013 Dickson RP;Huang YJ;Martinez FJ;Huffnagle GB View More
24460444 Lung microbiome for clinicians. New discoveries about bugs in healthy and diseased lungs. Ann Am Thorac Soc 2014 Segal LN;Rom WN;Weiden MD View More
24722168 Probiotic Lactobacillus rhamnosus GG enhanced Th1 cellular immunity but did not affect antibody responses in a human gut microbiota transplanted neonatal gnotobiotic pig model. PLoS One 2014 Wen K;Tin C;Wang H;Yang X;Li G;Giri-Rachman E;Kocher J;Bui T;Clark-Deener S;Yuan L View More
25102107 The evolution of the hygiene hypothesis: the role of early-life exposures to viruses and microbes and their relationship to asthma and allergic diseases. Curr Opin Allergy Clin Immunol 2014 Daley D View More
25369458 Toward primary prevention of asthma. Reviewing the evidence for early-life respiratory viral infections as modifiable risk factors to prevent childhood asthma. Am J Respir Crit Care Med 2015 Feldman AS;He Y;Moore ML;Hershenson MB;Hartert TV View More
26271750 Changes in microbiota during experimental human Rhinovirus infection. BMC Infect Dis 2015 Hofstra JJ;Matamoros S;van de Pol MA;de Wever B;Tanck MW;Wendt-Knol H;Deijs M;van der Hoek L;Wolthers KC;Molenkamp R;Visser CE;Sterk PJ;Lutter R;de Jong MD View More
26854761 Early-life respiratory infections and asthma development: role in disease pathogenesis and potential targets for disease prevention. Curr Opin Allergy Clin Immunol 2016 Beigelman A;Bacharier LB View More
27061249 Respiratory syncytial virus and rhinovirus severe bronchiolitis are associated with distinct nasopharyngeal microbiota. J Allergy Clin Immunol 2016 Mansbach JM;Hasegawa K;Henke DM;Ajami NJ;Petrosino JF;Shaw CA;Piedra PA;Sullivan AF;Espinola JA;Camargo CA Jr View More
27497278 Advances in asthma 2015: Across the lifespan. J Allergy Clin Immunol 2016 Liu AH;Anderson WC 3rd;Dutmer CM;Searing DA;Szefler SJ View More
27687789 Bioaerosols in the Barcelona subway system. Indoor Air 2017 Triado-Margarit X;Veillette M;Duchaine C;Talbot M;Amato F;Minguillon MC;Martins V;de Miguel E;Casamayor EO;Moreno T View More
27923952 Differences in the Nasopharyngeal Microbiome During Acute Respiratory Tract Infection With Human Rhinovirus and Respiratory Syncytial Virus in Infancy. J Infect Dis 2016 Rosas-Salazar C;Shilts MH;Tovchigrechko A;Schobel S;Chappell JD;Larkin EK;Shankar J;Yooseph S;Nelson KE;Halpin RA;Moore ML;Anderson LJ;Peebles RS Jr;Das SR;Hartert TV View More
28183432 Lessons learned from birth cohort studies conducted in diverse environments. J Allergy Clin Immunol 2017 Jackson DJ;Gern JE;Lemanske RF Jr View More
28327377 Community-acquired rhinovirus infection is associated with changes in the airway microbiome. J Allergy Clin Immunol 2017 Kloepfer KM;Sarsani VK;Poroyko V;Lee WM;Pappas TE;Kang T;Grindle KA;Bochkov YA;Janga SC;Lemanske RF Jr;Gern JE View More
28363939 Nasopharyngeal microbiome in premature infants and stability during rhinovirus infection. J Investig Med 2017 Perez GF;Perez-Losada M;Isaza N;Rose MC;Colberg-Poley AM;Nino G View More
28637803 Protein Malnutrition Alters Tryptophan and Angiotensin-Converting Enzyme 2 Homeostasis and Adaptive Immune Responses in Human Rotavirus-Infected Gnotobiotic Pigs with Human Infant Fecal Microbiota Transplant. Clin Vaccine Immunol 2017 Fischer DD;Kandasamy S;Paim FC;Langel SN;Alhamo MA;Shao L;Chepngeno J;Miyazaki A;Huang HC;Kumar A;Rajashekara G;Saif LJ;Vlasova AN View More
28987219 Role of viral infections in the development and exacerbation of asthma in children. J Allergy Clin Immunol 2017 Jartti T;Gern JE View More
29022385 Effect of antibiotic, probiotic, and human rotavirus infection on colonisation dynamics of defined commensal microbiota in a gnotobiotic pig model. Benef Microbes 2018 Huang HC;Vlasova AN;Kumar A;Kandasamy S;Fischer DD;Deblais L;Paim FC;Langel SN;Alhamo MA;Rauf A;Shao L;Saif LJ;Rajashekara G View More
30061588 Nasal microbiota clusters associate with inflammatory response, viral load, and symptom severity in experimental rhinovirus challenge. Sci Rep 2018 Lehtinen MJ;Hibberd AA;Mannikko S;Yeung N;Kauko T;Forssten S;Lehtoranta L;Lahtinen SJ;Stahl B;Lyra A;Turner RB View More
30219368 Protein deficiency reduces efficacy of oral attenuated human rotavirus vaccine in a human infant fecal microbiota transplanted gnotobiotic pig model. Vaccine 2018 Miyazaki A;Kandasamy S;Michael H;Langel SN;Paim FC;Chepngeno J;Alhamo MA;Fischer DD;Huang HC;Srivastava V;Kathayat D;Deblais L;Rajashekara G;Saif LJ;Vlasova AN View More
30240701 Severe bronchiolitis profiles and risk of recurrent wheeze by age 3 years. J Allergy Clin Immunol 2019 Dumas O;Hasegawa K;Mansbach JM;Sullivan AF;Piedra PA;Camargo CA Jr View More
30344303 Lower Airway Virology in Health and Disease-From Invaders to Symbionts. Medicina (Kaunas) 2018 Jankauskaite L;Miseviciene V;Vaideliene L;Kevalas R View More
30420263 Changes in the composition of the upper respiratory tract microbial community in granulomatosis with polyangiitis. J Autoimmun 2019 Lamprecht P;Fischer N;Huang J;Burkhardt L;Lutgehetmann M;Arndt F;Rolfs I;Kerstein A;Iking-Konert C;Laudien M View More
30513770 Small Animal Models of Respiratory Viral Infection Related to Asthma. Viruses 2018 Han M;Rajput C;Ishikawa T;Jarman CR;Lee J;Hershenson MB View More
30639346 Report from the National Institute of Allergy and Infectious Diseases workshop on "Atopic dermatitis and the atopic march: Mechanisms and interventions". J Allergy Clin Immunol 2019 Davidson WF;Leung DYM;Beck LA;Berin CM;Boguniewicz M;Busse WW;Chatila TA;Geha RS;Gern JE;Guttman-Yassky E;Irvine AD;Kim BS;Kong HH;Lack G;Nadeau KC;Schwaninger J;Simpson A;Simpson EL;Spergel JM;Togias A;Wahn U;Wood RA;Woodfolk JA;Ziegler SF;Plaut M View More
30654045 Association between rhinovirus species and nasopharyngeal microbiota in infants with severe bronchiolitis. J Allergy Clin Immunol 2019 Toivonen L;Camargo CA Jr;Gern JE;Bochkov YA;Mansbach JM;Piedra PA;Hasegawa K View More
30954166 Childhood Asthma Inception and Progression: Role of Microbial Exposures, Susceptibility to Viruses and Early Allergic Sensitization. Immunol Allergy Clin North Am 2019 Martinez FD View More
31054799 The impact of viral bronchiolitis phenotyping: Is it time to consider phenotype-specific responses to individualize pharmacological management? Paediatr Respir Rev 2020 Rodriguez-Martinez CE;Castro-Rodriguez JA;Nino G;Midulla F View More
31106653 Relationship between nasopharyngeal microbiota and patient\'s susceptibility to viral infection. Expert Rev Anti Infect Ther 2019 Dubourg G;Edouard S;Raoult D View More
31201890 Distinct nasal airway bacterial microbiotas differentially relate to exacerbation in pediatric patients with asthma. J Allergy Clin Immunol 2019 McCauley K;Durack J;Valladares R;Fadrosh DW;Lin DL;Calatroni A;LeBeau PK;Tran HT;Fujimura KE;LaMere B;Merana G;Lynch K;Cohen RT;Pongracic J;Khurana Hershey GK;Kercsmar CM;Gill M;Liu AH;Kim H;Kattan M;Teach SJ;Togias A;Boushey HA;Gern JE;Jackson DJ;Lynch SV View More
31985546 The role of atopy in asthma development and persistence. Curr Opin Allergy Clin Immunol 2020 Di Cicco M;D'Elios S;Peroni DG;Comberiati P View More
32117313 Malnutrition Decreases Antibody Secreting Cell Numbers Induced by an Oral Attenuated Human Rotavirus Vaccine in a Human Infant Fecal Microbiota Transplanted Gnotobiotic Pig Model. Front Immunol 2020 Michael H;Langel SN;Miyazaki A;Paim FC;Chepngeno J;Alhamo MA;Fischer DD;Srivastava V;Kathayat D;Deblais L;Rajashekara G;Saif LJ;Vlasova AN View More
33091409 Developmental patterns in the nasopharyngeal microbiome during infancy are associated with asthma risk. J Allergy Clin Immunol 2021 Tang HHF;Lang A;Teo SM;Judd LM;Gangnon R;Evans MD;Lee KE;Vrtis R;Holt PG;Lemanske RF Jr;Jackson DJ;Holt KE;Inouye M;Gern JE View More
33245014 Reduced rotavirus vaccine efficacy in protein malnourished human-faecal-microbiota-transplanted gnotobiotic pig model is in part attributed to the gut microbiota. Benef Microbes 2020 Srivastava V;Deblais L;Huang HC;Miyazaki A;Kandasamy S;Langel SN;Paim FC;Chepngeno J;Kathayat D;Vlasova AN;Saif LJ;Rajashekara G View More
33393596 Upper Respiratory Microbiota in Relation to Ear and Nose Health Among Australian Aboriginal and Torres Strait Islander Children. J Pediatric Infect Dis Soc 2021 Coleman A;Bialasiewicz S;Marsh RL;Grahn Hakansson E;Cottrell K;Wood A;Jayasundara N;Ware RS;Zaugg J;Sidjabat HE;Adams J;Ferguson J;Brown M;Roos K;Cervin A View More
33588407 Role of Upper Respiratory Microbiota and Virome in Childhood Rhinitis and Wheeze: Collegium Internationale Allergologicum Update 2021. Int Arch Allergy Immunol 2021 Tay CJX;Ta LDH;Ow Yeong YX;Yap GC;Chu JJH;Lee BW;Tham EH View More
33592026 Escherichia coli Nissle 1917 administered as a dextranomar microsphere biofilm enhances immune responses against human rotavirus in a neonatal malnourished pig model colonized with human infant fecal microbiota. PLoS One 2021 Michael H;Paim FC;Miyazaki A;Langel SN;Fischer DD;Chepngeno J;Goodman SD;Rajashekara G;Saif LJ;Vlasova AN View More
33962007 Microbial co-infections in COVID-19: Associated microbiota and underlying mechanisms of pathogenesis. Microb Pathog 2021 Hoque MN;Akter S;Mishu ID;Islam MR;Rahman MS;Akhter M;Islam I;Hasan MM;Rahaman MM;Sultana M;Islam T;Hossain MA View More
34127671 Integrated omics endotyping of infants with respiratory syncytial virus bronchiolitis and risk of childhood asthma. Nat Commun 2021 Raita Y;Perez-Losada M;Freishtat RJ;Harmon B;Mansbach JM;Piedra PA;Zhu Z;Camargo CA;Hasegawa K View More
34322716 The role of CDHR3 in susceptibility to otitis media. J Mol Med (Berl) 2021 Hirsch SD;Elling CL;Bootpetch TC;Scholes MA;Hafren L;Streubel SO;Pine HS;Wine TM;Szeremeta W;Prager JD;Einarsdottir E;Yousaf A;Baschal EE;Rehman S;Bamshad MJ;Nickerson DA;Riazuddin S;Leal SM;Ahmed ZM;Yoon PJ;Kere J;Chan KH;Mattila PS;Friedman NR;Chonmaitree T;Frank DN;Ryan AF;Santos-Cortez RLP View More
34819600 Nasopharyngeal microbiota in hospitalized children with Bordetella pertussis and Rhinovirus infection. Sci Rep 2021 Tozzi AE;Del Chierico F;Pandolfi E;Reddel S;Gesualdo F;Gardini S;Guarrasi V;Russo L;Croci I;Campagna I;Linardos G;Concato C;Villani A;Putignani L View More
35074599 Rhinovirus Infections and Their Roles in Asthma: Etiology and Exacerbations. J Allergy Clin Immunol Pract 2022 Jackson DJ;Gern JE View More
35149044 Seasonal airway microbiome and transcriptome interactions promote childhood asthma exacerbations. J Allergy Clin Immunol 2022 McCauley KE;Flynn K;Calatroni A;DiMassa V;LaMere B;Fadrosh DW;Lynch KV;Gill MA;Pongracic JA;Khurana Hershey GK;Kercsmar CM;Liu AH;Johnson CC;Kim H;Kattan M;O'Connor GT;Bacharier LB;Teach SJ;Gergen PJ;Wheatley LM;Togias A;LeBeau P;Presnell S;Boushey HA;Busse WW;Gern JE;Jackson DJ;Altman MC;Lynch SV View More
36073800 The Combined Escherichia coli Nissle 1917 and Tryptophan Treatment Modulates Immune and Metabolome Responses to Human Rotavirus Infection in a Human Infant Fecal Microbiota-Transplanted Malnourished Gnotobiotic Pig Model. mSphere 2022 Michael H;Srivastava V;Deblais L;Amimo JO;Chepngeno J;Saif LJ;Rajashekara G;Vlasova AN View More
36934642 Analysis of the nasopharyngeal microbiome and respiratory pathogens in COVID-19 patients from Saudi Arabia. J Infect Public Health 2023 Yasir M;Al-Sharif HA;Al-Subhi T;Sindi AA;Bokhary DH;El-Daly MM;Alosaimi B;Hamed ME;Karim AM;Hassan AM;AlShawdari MM;Alawi M;El-Kafrawy SA;Azhar EI View More
36988404 Impact of the bacterial nasopharyngeal microbiota on the severity of genus enterovirus lower respiratory tract infection in children: A case-control study. Pediatr Pulmonol 2023 Penela-Sanchez D;Rocafort M;Henares D;Jordan I;Brotons P;Cabrerizo M;Launes C;Munoz-Almagro C View More