PMID Title Journal Publication Year Author View in RVdb
10689095 A survey of expressed genes in the leukocytes of Japanese flounder, Paralichthys olivaceus, infected with Hirame rhabdovirus. Dev Comp Immunol 2000 Nam BH;Yamamoto E;Hirono I;Aoki T View More
15752548 Expression profiling of immune-related genes from Japanese flounder Paralichthys olivaceus kidney cells using cDNA microarrays. Dev Comp Immunol 2005 Kurobe T;Yasuike M;Kimura T;Hirono I;Aoki T View More
16210696 Rhinovirus induces airway epithelial gene expression through double-stranded RNA and IFN-dependent pathways. Am J Respir Cell Mol Biol 2006 Chen Y;Hamati E;Lee PK;Lee WM;Wachi S;Schnurr D;Yagi S;Dolganov G;Boushey H;Avila P;Wu R View More
17009208 Echinacea extracts modulate the production of multiple transcription factors in uninfected cells and rhinovirus-infected cells. Phytother Res 2006 Sharma M;Arnason JT;Hudson JB View More
17358043 Reduced toll-like receptor 4 and substance P gene expression is associated with airway bacterial colonization in children. Pediatr Pulmonol 2007 Grissell TV;Chang AB;Gibson PG View More
18066111 Modulation of immune response gene expression by echinacea extracts: results of a gene array analysis. Can J Physiol Pharmacol 2007 Altamirano-Dimas M;Hudson JB;Cochrane D;Nelson C;Arnason JT View More
18658112 Gene expression profiles during in vivo human rhinovirus infection: insights into the host response. Am J Respir Crit Care Med 2008 Proud D;Turner RB;Winther B;Wiehler S;Tiesman JP;Reichling TD;Juhlin KD;Fulmer AW;Ho BY;Walanski AA;Poore CL;Mizoguchi H;Jump L;Moore ML;Zukowski CK;Clymer JW View More
19326995 Differential expression of nuclear factor-kappaB mediates increased pulmonary expression of tumor necrosis factor-alpha and virus-induced asthma. Viral Immunol 2009 Uhl EW;Clarke TJ;Hogan RJ View More
19386802 Gene expression of nucleic acid-sensing pattern recognition receptors in children hospitalized for respiratory syncytial virus-associated acute bronchiolitis. Clin Vaccine Immunol 2009 Scagnolari C;Midulla F;Pierangeli A;Moretti C;Bonci E;Berardi R;De Angelis D;Selvaggi C;Di Marco P;Girardi E;Antonelli G View More
19664979 Gene expression signatures diagnose influenza and other symptomatic respiratory viral infections in humans. Cell Host Microbe 2009 Zaas AK;Chen M;Varkey J;Veldman T;Hero AO 3rd;Lucas J;Huang Y;Turner R;Gilbert A;Lambkin-Williams R;Oien NC;Nicholson B;Kingsmore S;Carin L;Woods CW;Ginsburg GS View More
19710636 Rhinovirus-induced modulation of gene expression in bronchial epithelial cells from subjects with asthma. Mucosal Immunol 2010 Bochkov YA;Hanson KM;Keles S;Brockman-Schneider RA;Jarjour NN;Gern JE View More
19783786 Human rhinovirus infection up-regulates MMP-9 production in airway epithelial cells via NF-{kappa}B. Am J Respir Cell Mol Biol 2010 Tacon CE;Wiehler S;Holden NS;Newton R;Proud D;Leigh R View More
20233835 Multiscale model for the assessment of autonomic dysfunction in human endotoxemia. Physiol Genomics 2010 Foteinou PT;Calvano SE;Lowry SF;Androulakis IP View More
20643599 Detection of viruses via statistical gene expression analysis. IEEE Trans Biomed Eng 2011 Chen M;Carlson D;Zaas A;Woods CW;Ginsburg GS;Hero A 3rd;Lucas J;Carin L View More
21062443 Bayesian inference of the number of factors in gene-expression analysis: application to human virus challenge studies. BMC Bioinformatics 2010 Chen B;Chen M;Paisley J;Zaas A;Woods C;Ginsburg GS;Hero A 3rd;Lucas J;Dunson D;Carin L View More
21184664 Inflammation and innate immune response against viral infections in marine fish. Curr Pharm Des 2010 Novoa B;Mackenzie S;Figueras A View More
21827718 IPNV with high and low virulence: host immune responses and viral mutations during infection. Virol J 2011 Skjesol A;Skjaeveland I;Elnaes M;Timmerhaus G;Fredriksen BN;Jorgensen SM;Krasnov A;Jorgensen JB View More
22424236 Personal omics profiling reveals dynamic molecular and medical phenotypes. Cell 2012 Chen R;Mias GI;Li-Pook-Than J;Jiang L;Lam HY;Chen R;Miriami E;Karczewski KJ;Hariharan M;Dewey FE;Cheng Y;Clark MJ;Im H;Habegger L;Balasubramanian S;O'Huallachain M;Dudley JT;Hillenmeyer S;Haraksingh R;Sharon D;Euskirchen G;Lacroute P;Bettinger K;Boyle AP;Kasowski M;Grubert F;Seki S;Garcia M;Whirl-Carrillo M;Gallardo M;Blasco MA;Greenberg PL;Snyder P;Klein TE;Altman RB;Butte AJ;Ashley EA;Gerstein M;Nadeau KC;Tang H;Snyder M View More
22432004 Identification of common biological pathways and drug targets across multiple respiratory viruses based on human host gene expression analysis. PLoS One 2012 Smith SB;Dampier W;Tozeren A;Brown JR;Magid-Slav M View More
22474614 Host genes important to HIV replication and evolution. Cold Spring Harb Perspect Med 2012 Telenti A;Johnson WE View More
24465555 Primary EBV infection induces an expression profile distinct from other viruses but similar to hemophagocytic syndromes. PLoS One 2014 Dunmire SK;Odumade OA;Porter JL;Reyes-Genere J;Schmeling DO;Bilgic H;Fan D;Baechler EC;Balfour HH Jr;Hogquist KA View More
24588727 Th2-type cytokine-induced mucus metaplasia decreases susceptibility of human bronchial epithelium to rhinovirus infection. Am J Respir Cell Mol Biol 2014 Jakiela B;Gielicz A;Plutecka H;Hubalewska-Mazgaj M;Mastalerz L;Bochenek G;Soja J;Januszek R;Aab A;Musial J;Akdis M;Akdis CA;Sanak M View More
24641803 Differential responses to rhinovirus- and influenza-associated pulmonary exacerbations in patients with cystic fibrosis. Ann Am Thorac Soc 2014 Ramirez IA;Caverly LJ;Kalikin LM;Goldsmith AM;Lewis TC;Burke DT;LiPuma JJ;Sajjan US;Hershenson MB View More
24684577 Distinct regulation of tonsillar immune response in virus infection. Allergy 2014 Jartti T;Palomares O;Waris M;Tastan O;Nieminen R;Puhakka T;Ruckert B;Aab A;Vuorinen T;Allander T;Vahlberg T;Ruuskanen O;Akdis M;Akdis CA View More
25027362 Viral respiratory tract infections in the neonatal intensive care unit: the VIRIoN-I study. J Pediatr 2014 Ronchi A;Michelow IC;Chapin KC;Bliss JM;Pugni L;Mosca F;Sanchez PJ View More
25797143 Towards a PBMC "virogram assay" for precision medicine: Concordance between ex vivo and in vivo viral infection transcriptomes. J Biomed Inform 2015 Gardeux V;Bosco A;Li J;Halonen MJ;Jackson D;Martinez FD;Lussier YA View More
25874939 Host genetic variation influences gene expression response to rhinovirus infection. PLoS Genet 2015 Caliskan M;Baker SW;Gilad Y;Ober C View More
26209405 Pathogen transcriptional profile in nasopharyngeal aspirates of children with acute respiratory tract infection. J Clin Virol 2015 Fukutani KF;Nascimento-Carvalho CM;Van der Gucht W;Wollants E;Khouri R;Dierckx T;Van Ranst M;Houspie L;Bouzas ML;Oliveira JR;Barral A;Van Weyenbergh J;de Oliveira CI View More
26571305 Rhinovirus Detection in Symptomatic and Asymptomatic Children: Value of Host Transcriptome Analysis. Am J Respir Crit Care Med 2016 Heinonen S;Jartti T;Garcia C;Oliva S;Smitherman C;Anguiano E;de Steenhuijsen Piters WA;Vuorinen T;Ruuskanen O;Dimo B;Suarez NM;Pascual V;Ramilo O;Mejias A View More
27035780 An Expression of Clinical Significance: Exploring the Human Genome to Understand the Variable Response to Rhinovirus. Am J Respir Crit Care Med 2016 Langelier C;Christenson SA View More
27833115 Transcriptome assists prognosis of disease severity in respiratory syncytial virus infected infants. Sci Rep 2016 Jong VL;Ahout IM;van den Ham HJ;Jans J;Zaaraoui-Boutahar F;Zomer A;Simonetti E;Bijl MA;Brand HK;van IJcken WF;de Jonge MI;Fraaij PL;de Groot R;Osterhaus AD;Eijkemans MJ;Ferwerda G;Andeweg AC View More
28273165 Transcriptome profiling of influenza A virus-infected lung epithelial (A549) cells with lariciresinol-4-beta-D-glucopyranoside treatment. PLoS One 2017 Zhou B;Li J;Liang X;Yang Z;Jiang Z View More
28558071 Gene expression patterns induced at different stages of rhinovirus infection in human alveolar epithelial cells. PLoS One 2017 Reza Etemadi M;Ling KH;Zainal Abidin S;Chee HY;Sekawi Z View More
29029245 Host Transcription Profile in Nasal Epithelium and Whole Blood of Hospitalized Children Under 2 Years of Age With Respiratory Syncytial Virus Infection. J Infect Dis 2017 Do LAH;Pellet J;van Doorn HR;Tran AT;Nguyen BH;Tran TTL;Tran QH;Vo QB;Tran Dac NA;Trinh HN;Nguyen TTH;Le Binh BT;Nguyen HMK;Nguyen MT;Thai QT;Vo TV;Ngo NQM;Dang TKH;Cao NH;Tran TV;Ho LV;De Meulder B;Auffray C;Hofstra JJ;Farrar J;Bryant JE;de Jong M;Hibberd ML View More
29244796 RSV vs. rhinovirus bronchiolitis: difference in nasal airway microRNA profiles and NFkappaB signaling. Pediatr Res 2018 Hasegawa K;Perez-Losada M;Hoptay CE;Epstein S;Mansbach JM;Teach SJ;Piedra PA;Camargo CA Jr;Freishtat RJ View More
30150981 Atopy-Dependent and Independent Immune Responses in the Heightened Severity of Atopics to Respiratory Viral Infections: Rat Model Studies. Front Immunol 2018 Lauzon-Joset JF;Jones AC;Mincham KT;Thomas JA;Rosenthal LA;Bosco A;Holt PG;Strickland DH View More
30339221 Host Gene Expression in Nose and Blood for the Diagnosis of Viral Respiratory Infection. J Infect Dis 2019 Yu J;Peterson DR;Baran AM;Bhattacharya S;Wylie TN;Falsey AR;Mariani TJ;Storch GA View More
30339462 The ORMDL3 Asthma Gene Regulates ICAM1 and Has Multiple Effects on Cellular Inflammation. Am J Respir Crit Care Med 2019 Zhang Y;Willis-Owen SAG;Spiegel S;Lloyd CM;Moffatt MF;Cookson WOCM View More
31782358 New Computational Tool Based on Machine-learning Algorithms for the Identification of Rhinovirus Infection-Related Genes. Comb Chem High Throughput Screen 2019 Xu Y;Zhang YH;Li J;Pan XY;Huang T;Cai YD View More
31871241 Experimental Approaches to Identify Host Factors Important for Influenza Virus. Cold Spring Harb Perspect Med 2020 Schaack GA;Mehle A View More
32155831 A Meta-Analysis of Multiple Whole Blood Gene Expression Data Unveils a Diagnostic Host-Response Transcript Signature for Respiratory Syncytial Virus. Int J Mol Sci 2020 Barral-Arca R;Gomez-Carballa A;Cebey-Lopez M;Bello X;Martinon-Torres F;Salas A View More
33315853 Integrated Bioinformatics Analysis Reveals Key Candidate Genes and Cytokine Pathways Involved in COVID-19 After Rhinovirus Infection in Asthma Patients. Med Sci Monit 2020 Dai W;Cao D;Zhang W;Wei Y;Ding D;Li B;Gao Y;Zhao L;Jiang Y;Kong X View More
34128960 Dynamic innate immune response determines susceptibility to SARS-CoV-2 infection and early replication kinetics. J Exp Med 2021 Cheemarla NR;Watkins TA;Mihaylova VT;Wang B;Zhao D;Wang G;Landry ML;Foxman EF View More
34140575 Remodeling of bronchial epithelium caused by asthmatic inflammation affects its response to rhinovirus infection. Sci Rep 2021 Jakiela B;Rebane A;Soja J;Bazan-Socha S;Laanesoo A;Plutecka H;Surmiak M;Sanak M;Sladek K;Bochenek G View More
34181859 Rhinovirus-induced Human Lung Tissue Responses Mimic Chronic Obstructive Pulmonary Disease and Asthma Gene Signatures. Am J Respir Cell Mol Biol 2021 Wronski S;Beinke S;Obernolte H;Belyaev NN;Saunders KA;Lennon MG;Schaudien D;Braubach P;Jonigk D;Warnecke G;Zardo P;Fieguth HG;Wilkens L;Braun A;Hessel EM;Sewald K View More
34232136 Host transcriptional signatures as predictive markers of infection in children. Curr Opin Infect Dis 2021 Mejias A;Cohen S;Glowinski R;Ramilo O View More
35176118 Total infectome characterization of respiratory infections in pre-COVID-19 Wuhan, China. PLoS Pathog 2022 Shi M;Zhao S;Yu B;Wu WC;Hu Y;Tian JH;Yin W;Ni F;Hu HL;Geng S;Tan L;Peng Y;Song ZG;Wang W;Chen YM;Holmes EC;Zhang YZ View More
36190000 Construction of MicroRNA-Target Interaction Networks Based on MicroRNA Expression Profiles of HRV16-infected H1-HeLa Cells. Biomed Environ Sci 2022 Song QQ;Wang YH;Wang XL;Shi BT;Wang RF;Song J;Wang WJ;Xia D;Xia ZQ;Wei Q;Han J View More
36528702 Pathway expression analysis. Sci Rep 2022 Mankovich N;Kehoe E;Peterson A;Kirby M View More