| RVdb StrainID | UNS05556 | GenBank Accession | KY094062.1 |
| Species | RVA | Sequence Length | 7158 nt |
| Serotype | 45 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Human rhinovirus sp. isolate 14MYKLU3891 from Malaysia polyprotein gene, complete cds | GenBank Submission Date | 2018-09-30 |
| Strain Name | 14MYKLU3891 | Sampling Date | 2014 |
| Sampling Country | Malaysia | Sampling location | Kuala Lumpur |
| Isolation Source | nasopharyngeal swab | NCBI Taxon ID | 169066 |
| Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQU012996 | 3'UTR | 7061 | 7097 | 0 | 0 | 37 | |
| SQU012997 | 5'UTR | 1 | 604 | 1 | 0 | 604 | |
| SQU012998 | CDS | 605 | 7060 | 0 | 0 | 6456 | |
| SQU012999 | VP4/2 | 605 | 1039 | 0 | 0 | 435 | |
| SQU013000 | 3D | 5681 | 7060 | 0 | 0 | 1380 | |
| SQU013001 | 2C (P2-C) | 3875 | 4837 | 0 | 0 | 963 | |
| SQU013002 | 1D (VP1) | 2306 | 3154 | 0 | 0 | 849 | |
| SQU013003 | 1B (VP2) | 812 | 1591 | 0 | 0 | 780 | |
| SQU013004 | 1C (VP3) | 1592 | 2305 | 0 | 0 | 714 | |
| SQU013005 | protease 3C | 5132 | 5680 | 0 | 0 | 549 | |
| SQU013006 | 2A (P2-A) | 3155 | 3589 | 0 | 0 | 435 | |
| SQU013007 | 2B (P2-B) | 3590 | 3874 | 0 | 0 | 285 | |
| SQU013008 | 3A (P3-A) | 4838 | 5068 | 0 | 0 | 231 | |
| SQU013009 | 1A (VP4) | 605 | 811 | 0 | 0 | 207 | |
| SQU013010 | 3B (VPg) | 5069 | 5131 | 0 | 0 | 63 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA033787 | CDS | 1 | 2164 | 0 | 0 | 2164 | |
| SPA033861 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA034071 | 3D | 1693 | 2152 | 0 | 0 | 460 | |
| SPA034072 | 2C (P2-C) | 1091 | 1411 | 0 | 0 | 321 | |
| SPA034073 | 1D (VP1) | 568 | 854 | 0 | 0 | 287 | |
| SPA034074 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
| SPA034075 | 1C (VP3) | 330 | 567 | 0 | 0 | 238 | |
| SPA034076 | protease 3C | 1510 | 1692 | 0 | 0 | 183 | |
| SPA034077 | 2A (P2-A) | 852 | 995 | 0 | 0 | 144 | |
| SPA034078 | 2B (P2-B) | 996 | 1090 | 0 | 0 | 95 | |
| SPA034079 | 3A (P3-A) | 1412 | 1488 | 0 | 0 | 77 | |
| SPA034080 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA034081 | 3B (VPg) | 1489 | 1509 | 0 | 0 | 21 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 29385423 | Viral Load and Sequence Analysis Reveal the Symptom Severity, Diversity, and Transmission Clusters of Rhinovirus Infections. | 2018 | Clin Infect Dis | View More |