| RVdb StrainID | UNS05553 | GenBank Accession | KY094059.1 |
| Species | RVA | Sequence Length | 7121 nt |
| Serotype | 45 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Human rhinovirus sp. isolate 12MYKLU1035 from Malaysia polyprotein gene, complete cds | GenBank Submission Date | 2018-09-30 |
| Strain Name | 12MYKLU1035 | Sampling Date | 2012 |
| Sampling Country | Malaysia | Sampling location | Kuala Lumpur |
| Isolation Source | nasopharyngeal swab | NCBI Taxon ID | 169066 |
| Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQU012952 | 3'UTR | 7061 | 7097 | 0 | 0 | 37 | |
| SQU012953 | 5'UTR | 1 | 604 | 1 | 0 | 604 | |
| SQU012954 | CDS | 605 | 7060 | 0 | 0 | 6456 | |
| SQU012955 | VP4/2 | 605 | 1039 | 0 | 0 | 435 | |
| SQU012956 | 3D | 5681 | 7060 | 0 | 0 | 1380 | |
| SQU012957 | 2C (P2-C) | 3875 | 4837 | 0 | 0 | 963 | |
| SQU012958 | 1D (VP1) | 2306 | 3154 | 0 | 0 | 849 | |
| SQU012959 | 1B (VP2) | 812 | 1591 | 0 | 0 | 780 | |
| SQU012960 | 1C (VP3) | 1592 | 2305 | 0 | 0 | 714 | |
| SQU012961 | protease 3C | 5132 | 5680 | 0 | 0 | 549 | |
| SQU012962 | 2A (P2-A) | 3155 | 3589 | 0 | 0 | 435 | |
| SQU012963 | 2B (P2-B) | 3590 | 3874 | 0 | 0 | 285 | |
| SQU012964 | 3A (P3-A) | 4838 | 5068 | 0 | 0 | 231 | |
| SQU012965 | 1A (VP4) | 605 | 811 | 0 | 0 | 207 | |
| SQU012966 | 3B (VPg) | 5069 | 5131 | 0 | 0 | 63 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA033790 | CDS | 1 | 2164 | 0 | 0 | 2164 | |
| SPA033864 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA034104 | 3D | 1693 | 2152 | 0 | 0 | 460 | |
| SPA034105 | 2C (P2-C) | 1091 | 1411 | 0 | 0 | 321 | |
| SPA034106 | 1D (VP1) | 568 | 854 | 0 | 0 | 287 | |
| SPA034107 | 1B (VP2) | 70 | 326 | 0 | 0 | 257 | |
| SPA034108 | 1C (VP3) | 330 | 567 | 0 | 0 | 238 | |
| SPA034109 | protease 3C | 1510 | 1692 | 0 | 0 | 183 | |
| SPA034110 | 2A (P2-A) | 852 | 995 | 0 | 0 | 144 | |
| SPA034111 | 2B (P2-B) | 996 | 1090 | 0 | 0 | 95 | |
| SPA034112 | 3A (P3-A) | 1412 | 1488 | 0 | 0 | 77 | |
| SPA034113 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA034114 | 3B (VPg) | 1489 | 1509 | 0 | 0 | 21 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 29385423 | Viral Load and Sequence Analysis Reveal the Symptom Severity, Diversity, and Transmission Clusters of Rhinovirus Infections. | 2018 | Clin Infect Dis | View More |