| RVdb StrainID | CNZ05936 | GenBank Accession | EU840728.1 |
| Species | RVC | Sequence Length | 3055 nt |
| Serotype | 19 Checked by RVdb | Serotype (GenBank) | 19 |
| Definition | Rhinovirus C19 strain CL-Fnp5 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | CL-Fnp5 | Sampling Date | from 2003-11 to 2008 |
| Sampling Country | Switzerland | Sampling location | different regions of Switzerland |
| Isolation Source | NPS | NCBI Taxon ID | 1418043 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC022067 | 1A (VP4) | 441 | 641 | 0 | 0 | 201 | |
| SQC022068 | 1B (VP2) | 642 | 1456 | 0 | 0 | 815 | |
| SQC022069 | 1C (VP3) | 1457 | 2165 | 0 | 0 | 709 | |
| SQC022070 | 1D (VP1) | 2166 | 2990 | 0 | 0 | 825 | |
| SQC022071 | CDS | 441 | 0 | 0 | 1 | 2615 | |
| SQC022072 | VP4/2 | 441 | 871 | 0 | 0 | 431 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC000534 | CDS | 1 | 872 | 0 | 1 | 872 | |
| SPC000535 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC000536 | 1D (VP1) | 576 | 850 | 0 | 0 | 275 | |
| SPC000537 | 1B (VP2) | 68 | 339 | 0 | 0 | 272 | |
| SPC000538 | 1C (VP3) | 340 | 575 | 0 | 0 | 236 | |
| SPC000539 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19402957 | New respiratory enterovirus and recombinant rhinoviruses among circulating picornaviruses. | 2009 | Emerg Infect Dis | View More |