| RVdb StrainID | CNZ05741 | GenBank Accession | GQ323774.1 |
| Species | RVC | Sequence Length | 7010 nt |
| Serotype | 10 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Human rhinovirus C strain QCE, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | HRV-QCE | Sampling Date | 2003 |
| Sampling Country | Australia | Sampling location | Queensland hospitals |
| Isolation Source | nasopharyngeal aspirate | NCBI Taxon ID | 655428 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC021951 | 1A (VP4) | 588 | 788 | 0 | 0 | 201 | |
| SQC021952 | 1B (VP2) | 789 | 1574 | 0 | 0 | 786 | |
| SQC021953 | 1C (VP3) | 1575 | 2276 | 0 | 0 | 702 | |
| SQC021954 | 1D (VP1) | 2277 | 3104 | 0 | 0 | 828 | |
| SQC021955 | 2A (P2-A) | 3105 | 3518 | 0 | 0 | 414 | |
| SQC021956 | 2B (P2-B) | 3519 | 3809 | 0 | 0 | 291 | |
| SQC021957 | 2C (P2-C) | 3810 | 4784 | 0 | 0 | 975 | |
| SQC021958 | 3A (P3-A) | 4785 | 5012 | 0 | 0 | 228 | |
| SQC021959 | 3B (VPg) | 5013 | 5078 | 0 | 0 | 66 | |
| SQC021960 | 3D | 5628 | 7007 | 0 | 0 | 1380 | |
| SQC021961 | 5'UTR | 0 | 587 | 1 | 0 | 587 | |
| SQC021962 | CDS | 588 | 7010 | 0 | 0 | 6423 | |
| SQC021963 | protease 3C | 5079 | 5627 | 0 | 0 | 549 | |
| SQC021964 | VP4/2 | 588 | 1018 | 0 | 0 | 431 | |
| SQC021965 | genome | 1 | 7010 | 1 | 1 | 7010 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC000551 | CDS | 1 | 2140 | 0 | 0 | 2140 | |
| SPC000552 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC000553 | 3D | 1681 | 2140 | 0 | 0 | 460 | |
| SPC000554 | 2C (P2-C) | 1075 | 1399 | 0 | 0 | 325 | |
| SPC000555 | 1D (VP1) | 564 | 839 | 0 | 0 | 276 | |
| SPC000556 | 1B (VP2) | 68 | 329 | 0 | 0 | 262 | |
| SPC000557 | 1C (VP3) | 330 | 563 | 0 | 0 | 234 | |
| SPC000558 | protease 3C | 1498 | 1680 | 0 | 0 | 183 | |
| SPC000559 | 2A (P2-A) | 840 | 977 | 0 | 0 | 138 | |
| SPC000560 | 2B (P2-B) | 978 | 1074 | 0 | 0 | 97 | |
| SPC000561 | 3A (P3-A) | 1400 | 1475 | 0 | 0 | 76 | |
| SPC000562 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC000563 | 3B (VPg) | 1476 | 1497 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 20106717 | Molecular characterization and distinguishing features of a novel human rhinovirus (HRV) C, HRVC-QCE, detected in children with fever, cough and wheeze during 2003. | 2010 | J Clin Virol | View More |