| RVdb StrainID | CNZ05221 | GenBank Accession | HQ123440.1 |
| Species | RVC | Sequence Length | 6450 nt |
| Serotype | 25 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Human rhinovirus C strain CU072 polyprotein gene, complete cds | GenBank Submission Date | 2022-11-06 |
| Strain Name | CU072 | Sampling Date | 2006-07-03 |
| Sampling Country | Thailand | Sampling location | King Chulalongkorn Memorial Hospital |
| Isolation Source | nasopharyngeal aspirates of patients | NCBI Taxon ID | 463676 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC021722 | 1A (VP4) | 1 | 201 | 0 | 0 | 201 | |
| SQC021723 | 1B (VP2) | 202 | 996 | 0 | 0 | 795 | |
| SQC021724 | 1C (VP3) | 997 | 1707 | 0 | 0 | 711 | |
| SQC021725 | 1D (VP1) | 1708 | 2544 | 0 | 0 | 837 | |
| SQC021726 | 2A (P2-A) | 2545 | 2952 | 0 | 0 | 408 | |
| SQC021727 | 2B (P2-B) | 2953 | 3249 | 0 | 0 | 297 | |
| SQC021728 | 2C (P2-C) | 3250 | 4227 | 0 | 0 | 978 | |
| SQC021729 | 3A (P3-A) | 4228 | 4452 | 0 | 0 | 225 | |
| SQC021730 | 3B (VPg) | 4453 | 4518 | 0 | 0 | 66 | |
| SQC021731 | 3D | 5068 | 6447 | 0 | 0 | 1380 | |
| SQC021732 | CDS | 1 | 6450 | 0 | 0 | 6450 | |
| SQC021733 | protease 3C | 4519 | 5067 | 0 | 0 | 549 | |
| SQC021734 | VP4/2 | 1 | 431 | 0 | 0 | 431 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC001626 | CDS | 1 | 2149 | 0 | 0 | 2149 | |
| SPC001627 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC001628 | 3D | 1690 | 2149 | 0 | 0 | 460 | |
| SPC001629 | 2C (P2-C) | 1084 | 1409 | 0 | 0 | 326 | |
| SPC001630 | 1D (VP1) | 569 | 842 | 0 | 0 | 274 | |
| SPC001631 | 1B (VP2) | 68 | 332 | 0 | 0 | 265 | |
| SPC001632 | 1C (VP3) | 333 | 568 | 0 | 0 | 236 | |
| SPC001633 | protease 3C | 1507 | 1689 | 0 | 0 | 183 | |
| SPC001634 | 2A (P2-A) | 843 | 984 | 0 | 0 | 142 | |
| SPC001635 | 2B (P2-B) | 985 | 1083 | 0 | 0 | 99 | |
| SPC001636 | 3A (P3-A) | 1410 | 1484 | 0 | 0 | 75 | |
| SPC001637 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC001638 | 3B (VPg) | 1485 | 1506 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 21214911 | Complete coding sequence characterization and comparative analysis of the putative novel human rhinovirus (HRV) species C and B. | 2011 | Virol J | View More |