RVdb StrainID CNZ04971 GenBank Accession JF317016.1
Species RVC Sequence Length 7132 nt
Serotype Added by RVdb Serotype (GenBank) -N/A-
Definition Human rhinovirus C isolate LZ651, complete genome GenBank Submission Date 2022-11-06
Strain Name LZ651 Sampling Date from 2008-10 to 2019-12
Sampling Country China Sampling location Guangdong Panyu Maternal and Child Health Hospital
Isolation Source nasopharyngeal aspirates of patients NCBI Taxon ID 463676
Sequencing Technology -N/A- Assembly Method -N/A-

Download selected NT sequences
SeqID Gene Name Start End StartTruncated EndTruncated Length
SQC021585 1A (VP4) 612 812 0 0 201
SQC021586 1B (VP2) 813 1598 0 0 786
SQC021587 1C (VP3) 1599 2297 0 0 699
SQC021588 1D (VP1) 2298 3122 0 0 825
SQC021589 2A (P2-A) 3123 3548 0 0 426
SQC021590 2B (P2-B) 3549 3839 0 0 291
SQC021591 2C (P2-C) 3840 4814 0 0 975
SQC021592 3'UTR 7041 7087 0 0 47
SQC021593 3A (P3-A) 4815 5042 0 0 228
SQC021594 3B (VPg) 5043 5108 0 0 66
SQC021595 3D 5658 7037 0 0 1380
SQC021596 5'UTR 1 611 0 0 611
SQC021597 CDS 612 7040 0 0 6429
SQC021598 protease 3C 5109 5657 0 0 549
SQC021599 VP4/2 612 1042 0 0 431
SQC021600 genome 1 7132 0 0 7132
Download selected AA sequences
SeqID Gene Name Start End StartTruncated EndTruncated Length
SPC002197 CDS 1 2142 0 0 2142
SPC002198 VP4/2 1 145 0 0 145
SPC002199 3D 1683 2142 0 0 460
SPC002200 2C (P2-C) 1077 1401 0 0 325
SPC002201 1D (VP1) 560 837 0 0 278
SPC002202 1B (VP2) 68 329 0 0 262
SPC002203 1C (VP3) 330 559 0 0 230
SPC002204 protease 3C 1500 1682 0 0 183
SPC002205 2A (P2-A) 838 979 0 0 142
SPC002206 3A (P3-A) 1402 1477 0 0 76
SPC002207 1A (VP4) 1 67 0 0 67
SPC002208 3B (VPg) 1478 1499 0 0 22