RVdb StrainID | CNZ03601 | GenBank Accession | KR060011.1 |
Species | RVC | Sequence Length | 504 nt |
Serotype | 7 | Serotype (GenBank) | 7 |
Definition | Rhinovirus C isolate KENHRV021 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
Strain Name | KENHRV021 | Sampling Date | 2008-05-08 |
Sampling Country | Kenya | Sampling location | Malindi, New Nyanza, Isiolo, Alupe, Port Reitz, Kisii, Kericho, and Mbagathi hospitals. |
Isolation Source | nasopharyngeal | NCBI Taxon ID | 463676 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | DNAbaser v. Version 4.0 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQC020802 | 1A (VP4) | 91 | 291 | 0 | 0 | 201 | |
SQC020803 | 5'UTR | 0 | 90 | 1 | 0 | 90 | |
SQC020804 | CDS | 91 | 0 | 0 | 1 | 414 | |
SQC020805 | VP4/2 | 91 | 0 | 0 | 1 | 414 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPC005365 | CDS | 1 | 138 | 0 | 1 | 138 | |
SPC005366 | VP4/2 | 1 | 138 | 0 | 1 | 138 | |
SPC005367 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
26822469 | Serotype and genetic diversity of human rhinovirus strains that circulated in Kenya in 2008. | 2016 | Influenza Other Respir Viruses | View More |