RVdb StrainID | CNZ03036 | GenBank Accession | LC004780.1 |
Species | RVC | Sequence Length | 2322 nt |
Serotype | 54 Added by RVdb | Serotype (GenBank) | -N/A- |
Definition | Rhinovirus C gene for polyprotein, VP2, VP3, VP1 region, partial cds, strain: HRV-C/JPN/Kumamoto11/2010 | GenBank Submission Date | 2022-11-03 |
Strain Name | HRV-C/JPN/Kumamoto11/2010 | Sampling Date | 2010 |
Sampling Country | Japan | Sampling location | Kanagawa, Yokohama |
Isolation Source | -N/A- | NCBI Taxon ID | 463676 |
Sequencing Technology | -N/A- | Assembly Method | -N/A- |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQC020413 | 1B (VP2) | 0 | 789 | 1 | 0 | 789 | |
SQC020414 | 1C (VP3) | 790 | 1506 | 0 | 0 | 717 | |
SQC020415 | 1D (VP1) | 1507 | 0 | 0 | 1 | 816 | |
SQC020416 | CDS | 0 | 0 | 1 | 1 | 2322 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPC010046 | CDS | 1 | 774 | 0 | 1 | 774 | |
SPC010047 | 1D (VP1) | 503 | 774 | 0 | 1 | 272 | |
SPC010048 | 1B (VP2) | 1 | 263 | 1 | 0 | 263 | |
SPC010049 | 1C (VP3) | 264 | 502 | 0 | 0 | 239 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
25640899 | Molecular evolution of the VP1, VP2, and VP3 genes in human rhinovirus species C. | 2015 | Sci Rep | View More |