| RVdb StrainID | CNZ02866 | GenBank Accession | LC428176.1 |
| Species | RVC | Sequence Length | 7033 nt |
| Serotype | 53 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Rhinovirus C C53-NIID JPN-2015 gene for polyprotein, partial cds | GenBank Submission Date | 2022-11-06 |
| Strain Name | C53-NIID JPN-2015 | Sampling Date | 2015-01-13 |
| Sampling Country | Japan | Sampling location | Tokyo |
| Isolation Source | -N/A- | NCBI Taxon ID | 463676 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC020286 | 1A (VP4) | 604 | 804 | 0 | 0 | 201 | |
| SQC020287 | 1B (VP2) | 805 | 1590 | 0 | 0 | 786 | |
| SQC020288 | 1C (VP3) | 1591 | 2298 | 0 | 0 | 708 | |
| SQC020289 | 1D (VP1) | 2299 | 3120 | 0 | 0 | 822 | |
| SQC020290 | 2A (P2-A) | 3121 | 3546 | 0 | 0 | 426 | |
| SQC020291 | 2B (P2-B) | 3547 | 3843 | 0 | 0 | 297 | |
| SQC020292 | 2C (P2-C) | 3844 | 4821 | 0 | 0 | 978 | |
| SQC020293 | 3A (P3-A) | 4822 | 5046 | 0 | 0 | 225 | |
| SQC020294 | 3B (VPg) | 5047 | 5112 | 0 | 0 | 66 | |
| SQC020295 | 3D | 5662 | 0 | 0 | 1 | 1372 | |
| SQC020296 | 5'UTR | 0 | 603 | 1 | 0 | 603 | |
| SQC020297 | CDS | 604 | 0 | 0 | 1 | 6430 | |
| SQC020298 | protease 3C | 5113 | 5661 | 0 | 0 | 549 | |
| SQC020299 | VP4/2 | 604 | 1034 | 0 | 0 | 431 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC010608 | CDS | 1 | 2143 | 0 | 0 | 2143 | |
| SPC010609 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC010610 | 3D | 1687 | 2143 | 0 | 1 | 457 | |
| SPC010611 | 2C (P2-C) | 1081 | 1406 | 0 | 0 | 326 | |
| SPC010612 | 1D (VP1) | 566 | 839 | 0 | 0 | 274 | |
| SPC010613 | 1B (VP2) | 68 | 329 | 0 | 0 | 262 | |
| SPC010614 | 1C (VP3) | 330 | 565 | 0 | 0 | 236 | |
| SPC010615 | protease 3C | 1504 | 1686 | 0 | 0 | 183 | |
| SPC010616 | 2A (P2-A) | 840 | 981 | 0 | 0 | 142 | |
| SPC010617 | 2B (P2-B) | 982 | 1080 | 0 | 0 | 99 | |
| SPC010618 | 3A (P3-A) | 1407 | 1481 | 0 | 0 | 75 | |
| SPC010619 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC010620 | 3B (VPg) | 1482 | 1503 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 30836639 | Propagation of Rhinovirus C in Differentiated Immortalized Human Airway HBEC3-KT Epithelial Cells. | 2019 | Viruses | View More |