| RVdb StrainID | CNZ01851 | GenBank Accession | MH828521.1 |
| Species | RVC | Sequence Length | 6441 nt |
| Serotype | 27 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Rhinovirus C strain vzhrvc5 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | vzhrvc5 | Sampling Date | 2013-03-14 |
| Sampling Country | Viet Nam | Sampling location | Viet Nam |
| Isolation Source | NT swab | NCBI Taxon ID | 463676 |
| Sequencing Technology | Illumina | Assembly Method | CLC Assembly v. 5.0.4 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC019769 | 1A (VP4) | 1 | 201 | 0 | 0 | 201 | |
| SQC019770 | 1B (VP2) | 202 | 996 | 0 | 0 | 795 | |
| SQC019771 | 1C (VP3) | 997 | 1713 | 0 | 0 | 717 | |
| SQC019772 | 1D (VP1) | 1714 | 2526 | 0 | 0 | 813 | |
| SQC019773 | 2A (P2-A) | 2527 | 2952 | 0 | 0 | 426 | |
| SQC019774 | 2B (P2-B) | 2953 | 3249 | 0 | 0 | 297 | |
| SQC019775 | 2C (P2-C) | 3250 | 4227 | 0 | 0 | 978 | |
| SQC019776 | 3A (P3-A) | 4228 | 4452 | 0 | 0 | 225 | |
| SQC019777 | 3B (VPg) | 4453 | 4518 | 0 | 0 | 66 | |
| SQC019778 | 3D | 5068 | 0 | 0 | 1 | 1374 | |
| SQC019779 | CDS | 1 | 0 | 0 | 1 | 6441 | |
| SQC019780 | protease 3C | 4519 | 5067 | 0 | 0 | 549 | |
| SQC019781 | VP4/2 | 1 | 431 | 0 | 0 | 431 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC017355 | CDS | 1 | 2147 | 0 | 0 | 2147 | |
| SPC017356 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC017357 | 3D | 1690 | 2147 | 0 | 1 | 458 | |
| SPC017358 | 2C (P2-C) | 1084 | 1409 | 0 | 0 | 326 | |
| SPC017359 | 1D (VP1) | 572 | 842 | 0 | 0 | 271 | |
| SPC017360 | 1B (VP2) | 68 | 332 | 0 | 0 | 265 | |
| SPC017361 | 1C (VP3) | 333 | 571 | 0 | 0 | 239 | |
| SPC017362 | protease 3C | 1507 | 1689 | 0 | 0 | 183 | |
| SPC017363 | 2A (P2-A) | 843 | 984 | 0 | 0 | 142 | |
| SPC017364 | 2B (P2-B) | 985 | 1083 | 0 | 0 | 99 | |
| SPC017365 | 3A (P3-A) | 1410 | 1484 | 0 | 0 | 75 | |
| SPC017366 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC017367 | 3B (VPg) | 1485 | 1506 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 32499763 | Epidemiology and Phylogenetic Analysis of Viral Respiratory Infections in Vietnam. | 2020 | Front Microbiol | View More |