| RVdb StrainID | CNZ01221 | GenBank Accession | MT641442.1 |
| Species | RVC | Sequence Length | 3949 nt |
| Serotype | 15 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Rhinovirus C strain CLI-B3-70-RhinoC polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | CLI-B3-70-RhinoC | Sampling Date | 2018-08-01 |
| Sampling Country | United Kingdom | Sampling location | Public Health England (PHE) |
| Isolation Source | respiratory | NCBI Taxon ID | 463676 |
| Sequencing Technology | Illumina | Assembly Method | Geneious v. 2020.0.3 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC019483 | 1A (VP4) | 76 | 276 | 0 | 0 | 201 | |
| SQC019484 | 1B (VP2) | 277 | 1071 | 0 | 0 | 795 | |
| SQC019485 | 1C (VP3) | 1072 | 1785 | 0 | 0 | 714 | |
| SQC019486 | 1D (VP1) | 1786 | 2613 | 0 | 0 | 828 | |
| SQC019487 | 2A (P2-A) | 2614 | 3039 | 0 | 0 | 426 | |
| SQC019488 | 2B (P2-B) | 3040 | 3336 | 0 | 0 | 297 | |
| SQC019489 | CDS | 76 | 0 | 0 | 1 | 3874 | |
| SQC019490 | VP4/2 | 76 | 506 | 0 | 0 | 431 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC011572 | CDS | 1 | 1291 | 0 | 1 | 1291 | |
| SPC011573 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC011574 | 1D (VP1) | 568 | 846 | 0 | 0 | 279 | |
| SPC011575 | 1B (VP2) | 68 | 332 | 0 | 0 | 265 | |
| SPC011576 | 1C (VP3) | 333 | 567 | 0 | 0 | 235 | |
| SPC011577 | 2A (P2-A) | 847 | 988 | 0 | 0 | 142 | |
| SPC011578 | 2B (P2-B) | 989 | 1087 | 0 | 0 | 99 | |
| SPC011579 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 33918088 | Detection and Typing of Human Enteroviruses from Clinical Samples by Entire-Capsid Next Generation Sequencing. | 2021 | Viruses | View More |