| RVdb StrainID | CNZ01211 | GenBank Accession | MW587060.1 |
| Species | RVC | Sequence Length | 7148 nt |
| Serotype | 19 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Rhinovirus C isolate S0595YZY polyprotein gene, complete cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | S0595YZY | Sampling Date | from 2016-05 to 2017-12 |
| Sampling Country | China | Sampling location | Wuhan |
| Isolation Source | bronchoalveolar lavage fluid | NCBI Taxon ID | 463676 |
| Sequencing Technology | Illumina | Assembly Method | Megahit v. v1.1.3 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC019467 | 1A (VP4) | 631 | 831 | 0 | 0 | 201 | |
| SQC019468 | 1B (VP2) | 832 | 1647 | 0 | 0 | 816 | |
| SQC019469 | 1C (VP3) | 1648 | 2355 | 0 | 0 | 708 | |
| SQC019470 | 1D (VP1) | 2356 | 3180 | 0 | 0 | 825 | |
| SQC019471 | 2A (P2-A) | 3181 | 3606 | 0 | 0 | 426 | |
| SQC019472 | 2B (P2-B) | 3607 | 3903 | 0 | 0 | 297 | |
| SQC019473 | 2C (P2-C) | 3904 | 4878 | 0 | 0 | 975 | |
| SQC019474 | 3A (P3-A) | 4879 | 5103 | 0 | 0 | 225 | |
| SQC019475 | 3B (VPg) | 5104 | 5169 | 0 | 0 | 66 | |
| SQC019476 | 3D | 5719 | 7098 | 0 | 0 | 1380 | |
| SQC019477 | 5'UTR | 1 | 630 | 0 | 0 | 630 | |
| SQC019478 | CDS | 631 | 7101 | 0 | 0 | 6471 | |
| SQC019479 | protease 3C | 5170 | 5718 | 0 | 0 | 549 | |
| SQC019480 | VP4/2 | 631 | 1061 | 0 | 0 | 431 | |
| SQC019481 | genome | 1 | 7148 | 0 | 1 | 7148 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC017278 | CDS | 1 | 2156 | 0 | 0 | 2156 | |
| SPC017279 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC017280 | 3D | 1697 | 2156 | 0 | 0 | 460 | |
| SPC017281 | 2C (P2-C) | 1092 | 1416 | 0 | 0 | 325 | |
| SPC017282 | 1D (VP1) | 576 | 850 | 0 | 0 | 275 | |
| SPC017283 | 1B (VP2) | 68 | 339 | 0 | 0 | 272 | |
| SPC017284 | 1C (VP3) | 340 | 575 | 0 | 0 | 236 | |
| SPC017285 | protease 3C | 1514 | 1696 | 0 | 0 | 183 | |
| SPC017286 | 2A (P2-A) | 851 | 992 | 0 | 0 | 142 | |
| SPC017287 | 2B (P2-B) | 993 | 1091 | 0 | 0 | 99 | |
| SPC017288 | 3A (P3-A) | 1417 | 1491 | 0 | 0 | 75 | |
| SPC017289 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC017290 | 3B (VPg) | 1492 | 1513 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35176118 | Total infectome characterization of respiratory infections in pre-COVID-19 Wuhan, China. | 2022 | PLoS Pathog | View More |