RVdb StrainID CNZ01211 GenBank Accession MW587060.1
Species RVC Sequence Length 7148 nt
Serotype 19  Added by RVdb Serotype (GenBank) -N/A-
Definition Rhinovirus C isolate S0595YZY polyprotein gene, complete cds GenBank Submission Date 2022-11-03
Strain Name S0595YZY Sampling Date from 2016-05 to 2017-12
Sampling Country China Sampling location Wuhan
Isolation Source bronchoalveolar lavage fluid NCBI Taxon ID 463676
Sequencing Technology Illumina Assembly Method Megahit v. v1.1.3

Download selected NT sequences
SeqID Gene Name Start End StartTruncated EndTruncated Length
SQC019467 1A (VP4) 631 831 0 0 201
SQC019468 1B (VP2) 832 1647 0 0 816
SQC019469 1C (VP3) 1648 2355 0 0 708
SQC019470 1D (VP1) 2356 3180 0 0 825
SQC019471 2A (P2-A) 3181 3606 0 0 426
SQC019472 2B (P2-B) 3607 3903 0 0 297
SQC019473 2C (P2-C) 3904 4878 0 0 975
SQC019474 3A (P3-A) 4879 5103 0 0 225
SQC019475 3B (VPg) 5104 5169 0 0 66
SQC019476 3D 5719 7098 0 0 1380
SQC019477 5'UTR 1 630 0 0 630
SQC019478 CDS 631 7101 0 0 6471
SQC019479 protease 3C 5170 5718 0 0 549
SQC019480 VP4/2 631 1061 0 0 431
SQC019481 genome 1 7148 0 1 7148
Download selected AA sequences
SeqID Gene Name Start End StartTruncated EndTruncated Length
SPC017278 CDS 1 2156 0 0 2156
SPC017279 VP4/2 1 145 0 0 145
SPC017280 3D 1697 2156 0 0 460
SPC017281 2C (P2-C) 1092 1416 0 0 325
SPC017282 1D (VP1) 576 850 0 0 275
SPC017283 1B (VP2) 68 339 0 0 272
SPC017284 1C (VP3) 340 575 0 0 236
SPC017285 protease 3C 1514 1696 0 0 183
SPC017286 2A (P2-A) 851 992 0 0 142
SPC017287 2B (P2-B) 993 1091 0 0 99
SPC017288 3A (P3-A) 1417 1491 0 0 75
SPC017289 1A (VP4) 1 67 0 0 67
SPC017290 3B (VPg) 1492 1513 0 0 22
PMID Title Publication Year Journal View in RVdb
35176118 Total infectome characterization of respiratory infections in pre-COVID-19 Wuhan, China. 2022 PLoS Pathog View More