| RVdb StrainID | CNS07402 | GenBank Accession | OR117037.1 |
| Species | RVC | Sequence Length | 390 nt |
| Serotype | -N/A- | Serotype (GenBank) | 42 |
| Definition | Rhinovirus C isolate RV-C42/HongKong/1127/2021 polyprotein gene, partial cds | GenBank Submission Date | 2023-09-04 |
| Strain Name | RV-C42/HongKong/1127/2021 | Sampling Date | 2021-04-03 |
| Sampling Country | China | Sampling location | Hong Kong |
| Isolation Source | -N/A- | NCBI Taxon ID | 463676 |
| Sequencing Technology | Nanopore | Assembly Method | bwa-mem v. 0.7.17-r1188 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC023771 | 1A (VP4) | 1 | 213 | 0 | 0 | 213 | |
| SQC023859 | CDS | 1 | 390 | 0 | 1 | 390 | |
| SQC023929 | VP4/2 | 1 | 390 | 0 | 1 | 390 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPX001580 | CDS | 1 | 130 | 0 | 0 | 130 | |
| SPX001617 | VP4/2 | 1 | 130 | 0 | 1 | 130 | |
| SPX001654 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPX001655 | 1B (VP2) | 70 | 130 | 0 | 1 | 61 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19402957 | New respiratory enterovirus and recombinant rhinoviruses among circulating picornaviruses. | 2009 | Emerg Infect Dis | View More |