| RVdb StrainID | CNS07330 | GenBank Accession | OP627864.1 |
| Species | RVC | Sequence Length | 2069 nt |
| Serotype | -N/A- | Serotype (GenBank) | 36 |
| Definition | Rhinovirus C strain NODE_9_WW-FT-March-2020-HRVC36-2069nt-AZ VP4-2C gene, partial cds | GenBank Submission Date | 2022-11-14 |
| Strain Name | NODE_9_WW-FT-March-2020-HRVC36-2069nt-AZ | Sampling Date | 2020 |
| Sampling Country | USA | Sampling location | southwest USA |
| Isolation Source | wastewater | NCBI Taxon ID | 463676 |
| Sequencing Technology | Illumina | Assembly Method | metaSPAdes v. v3.15.3 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC023573 | CDS | 88 | 2069 | 0 | 1 | 1982 | |
| SQC023574 | VP4/2 | 88 | 517 | 0 | 0 | 430 | |
| SQC023575 | 1B (VP2) | 295 | 1074 | 0 | 0 | 780 | |
| SQC023576 | 1C (VP3) | 1075 | 1782 | 0 | 0 | 708 | |
| SQC023577 | 1A (VP4) | 88 | 294 | 0 | 0 | 207 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 36203558 | Impact of sample clarification by size exclusion on virus detection and diversity in wastewater-based epidemiology. | 2022 | medRxiv | View More |