| RVdb StrainID | CNS07305 | GenBank Accession | OP342703.1 |
| Species | RVC | Sequence Length | 7106 nt |
| Serotype | 5 Checked by RVdb | Serotype (GenBank) | 5 |
| Definition | Rhinovirus C5 strain RVC5/China/2014/HBH10 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVC5/China/2014/HBH10 | Sampling Date | 2014-04-12 |
| Sampling Country | China | Sampling location | Hebei |
| Isolation Source | -N/A- | NCBI Taxon ID | 1418031 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC023501 | 3'UTR | 7073 | 7106 | 0 | 0 | 34 | |
| SQC023502 | 5'UTR | 1 | 613 | 0 | 0 | 613 | |
| SQC023503 | CDS | 614 | 7072 | 0 | 0 | 6459 | |
| SQC023504 | VP4/2 | 614 | 1048 | 0 | 0 | 435 | |
| SQC023505 | 3D | 5690 | 7069 | 0 | 0 | 1380 | |
| SQC023506 | 2C (P2-C) | 3872 | 4849 | 0 | 0 | 978 | |
| SQC023507 | 1D (VP1) | 2324 | 3148 | 0 | 0 | 825 | |
| SQC023508 | 1B (VP2) | 821 | 1606 | 0 | 0 | 786 | |
| SQC023509 | 1C (VP3) | 1607 | 2323 | 0 | 0 | 717 | |
| SQC023510 | protease 3C | 5141 | 5689 | 0 | 0 | 549 | |
| SQC023511 | 2A (P2-A) | 3149 | 3574 | 0 | 0 | 426 | |
| SQC023512 | 2B (P2-B) | 3575 | 3871 | 0 | 0 | 297 | |
| SQC023513 | 3A (P3-A) | 4850 | 5074 | 0 | 0 | 225 | |
| SQC023514 | 1A (VP4) | 614 | 820 | 0 | 0 | 207 | |
| SQC023515 | 3B (VPg) | 5075 | 5140 | 0 | 0 | 66 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC020017 | CDS | 1 | 2152 | 0 | 0 | 2152 | |
| SPC020056 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC020168 | 3D | 1693 | 2152 | 0 | 0 | 460 | |
| SPC020169 | 2C (P2-C) | 1087 | 1412 | 0 | 0 | 326 | |
| SPC020170 | 1D (VP1) | 571 | 845 | 0 | 0 | 275 | |
| SPC020171 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPC020172 | 1C (VP3) | 332 | 570 | 0 | 0 | 239 | |
| SPC020173 | protease 3C | 1510 | 1692 | 0 | 0 | 183 | |
| SPC020174 | 2A (P2-A) | 846 | 987 | 0 | 0 | 142 | |
| SPC020175 | 2B (P2-B) | 988 | 1086 | 0 | 0 | 99 | |
| SPC020176 | 3A (P3-A) | 1413 | 1487 | 0 | 0 | 75 | |
| SPC020177 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPC020178 | 3B (VPg) | 1488 | 1509 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |