| RVdb StrainID | CNS07304 | GenBank Accession | OP342702.1 |
| Species | RVC | Sequence Length | 7028 nt |
| Serotype | 6 Checked by RVdb | Serotype (GenBank) | 6 |
| Definition | Rhinovirus C6 strain RVC6/China/2017/BJP7 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVC6/China/2017/BJP7 | Sampling Date | 2017-03-03 |
| Sampling Country | China | Sampling location | Beijing |
| Isolation Source | -N/A- | NCBI Taxon ID | 1219378 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC023486 | 3'UTR | 6998 | 7028 | 0 | 1 | 31 | |
| SQC023487 | 5'UTR | 1 | 577 | 0 | 0 | 577 | |
| SQC023488 | CDS | 578 | 6997 | 0 | 0 | 6420 | |
| SQC023489 | VP4/2 | 578 | 1008 | 0 | 0 | 431 | |
| SQC023490 | 3D | 5615 | 6994 | 0 | 0 | 1380 | |
| SQC023491 | 2C (P2-C) | 3797 | 4771 | 0 | 0 | 975 | |
| SQC023492 | 1D (VP1) | 2264 | 3079 | 0 | 0 | 816 | |
| SQC023493 | 1B (VP2) | 785 | 1564 | 0 | 0 | 780 | |
| SQC023494 | 1C (VP3) | 1565 | 2263 | 0 | 0 | 699 | |
| SQC023495 | protease 3C | 5066 | 5614 | 0 | 0 | 549 | |
| SQC023496 | 2A (P2-A) | 3080 | 3505 | 0 | 0 | 426 | |
| SQC023497 | 2B (P2-B) | 3506 | 3796 | 0 | 0 | 291 | |
| SQC023498 | 3A (P3-A) | 4772 | 4999 | 0 | 0 | 228 | |
| SQC023499 | 1A (VP4) | 578 | 784 | 0 | 0 | 207 | |
| SQC023500 | 3B (VPg) | 5000 | 5065 | 0 | 0 | 66 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC020047 | CDS | 1 | 2139 | 0 | 0 | 2139 | |
| SPC020086 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC020497 | 3D | 1680 | 2139 | 0 | 0 | 460 | |
| SPC020498 | 2C (P2-C) | 1074 | 1398 | 0 | 0 | 325 | |
| SPC020499 | 1D (VP1) | 563 | 834 | 0 | 0 | 272 | |
| SPC020500 | 1B (VP2) | 70 | 329 | 0 | 0 | 260 | |
| SPC020501 | 1C (VP3) | 330 | 562 | 0 | 0 | 233 | |
| SPC020502 | protease 3C | 1497 | 1679 | 0 | 0 | 183 | |
| SPC020503 | 2A (P2-A) | 835 | 976 | 0 | 0 | 142 | |
| SPC020504 | 2B (P2-B) | 977 | 1073 | 0 | 0 | 97 | |
| SPC020505 | 3A (P3-A) | 1399 | 1474 | 0 | 0 | 76 | |
| SPC020506 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPC020507 | 3B (VPg) | 1475 | 1496 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |