| RVdb StrainID | CNS07301 | GenBank Accession | OP342699.1 |
| Species | RVC | Sequence Length | 6863 nt |
| Serotype | 15 Checked by RVdb | Serotype (GenBank) | 15 |
| Definition | Rhinovirus C15 strain RVC15/China/2017/BJP1 polyprotein genes, partial cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVC15/China/2017/BJP1 | Sampling Date | 2017-02-09 |
| Sampling Country | China | Sampling location | Beijing |
| Isolation Source | -N/A- | NCBI Taxon ID | 1418033 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC023444 | 5'UTR | 127 | 510 | 1 | 0 | 384 | |
| SQC023445 | CDS | 629 | 6863 | 1 | 1 | 6235 | |
| SQC023446 | CDS | 511 | 528 | 0 | 1 | 6235 | |
| SQC023447 | 3D | 5591 | 6862 | 0 | 0 | 1272 | |
| SQC023448 | 2C (P2-C) | 3773 | 4750 | 0 | 0 | 978 | |
| SQC023449 | 1D (VP1) | 2213 | 3049 | 0 | 0 | 837 | |
| SQC023450 | 1B (VP2) | 710 | 1507 | 0 | 0 | 798 | |
| SQC023451 | 1C (VP3) | 1508 | 2212 | 0 | 0 | 705 | |
| SQC023452 | protease 3C | 5042 | 5590 | 0 | 0 | 549 | |
| SQC023453 | 2A (P2-A) | 3050 | 3475 | 0 | 0 | 426 | |
| SQC023454 | 2B (P2-B) | 3476 | 3772 | 0 | 0 | 297 | |
| SQC023455 | 3A (P3-A) | 4751 | 4975 | 0 | 0 | 225 | |
| SQC023456 | 3B (VPg) | 4976 | 5041 | 0 | 0 | 66 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC020049 | CDS | 1 | 2078 | 0 | 0 | 2078 | |
| SPC020088 | VP4/2 | 1 | 95 | 1 | 0 | 95 | |
| SPC020518 | 3D | 1655 | 2078 | 0 | 0 | 424 | |
| SPC020519 | 2C (P2-C) | 1049 | 1374 | 0 | 0 | 326 | |
| SPC020520 | 1D (VP1) | 529 | 807 | 0 | 0 | 279 | |
| SPC020521 | 1B (VP2) | 28 | 293 | 0 | 0 | 266 | |
| SPC020522 | 1C (VP3) | 294 | 528 | 0 | 0 | 235 | |
| SPC020523 | protease 3C | 1472 | 1654 | 0 | 0 | 183 | |
| SPC020524 | 2A (P2-A) | 808 | 949 | 0 | 0 | 142 | |
| SPC020525 | 2B (P2-B) | 950 | 1048 | 0 | 0 | 99 | |
| SPC020526 | 3A (P3-A) | 1375 | 1449 | 0 | 0 | 75 | |
| SPC020527 | 3B (VPg) | 1450 | 1471 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |