| RVdb StrainID | CNS07300 | GenBank Accession | OP342698.1 |
| Species | RVC | Sequence Length | 7205 nt |
| Serotype | 15 Checked by RVdb | Serotype (GenBank) | 15 |
| Definition | Rhinovirus C15 strain RVC15/China/2017/BJR32 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVC15/China/2017/BJR32 | Sampling Date | 2017-12-26 |
| Sampling Country | China | Sampling location | Beijing |
| Isolation Source | -N/A- | NCBI Taxon ID | 1418033 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC023429 | 3'UTR | 7076 | 7117 | 0 | 0 | 42 | |
| SQC023430 | 5'UTR | 1 | 613 | 0 | 0 | 613 | |
| SQC023431 | CDS | 614 | 7075 | 0 | 0 | 6462 | |
| SQC023432 | VP4/2 | 614 | 1044 | 0 | 0 | 431 | |
| SQC023433 | 3D | 5693 | 7072 | 0 | 0 | 1380 | |
| SQC023434 | 2C (P2-C) | 3875 | 4852 | 0 | 0 | 978 | |
| SQC023435 | 1D (VP1) | 2315 | 3151 | 0 | 0 | 837 | |
| SQC023436 | 1B (VP2) | 815 | 1609 | 0 | 0 | 795 | |
| SQC023437 | 1C (VP3) | 1610 | 2314 | 0 | 0 | 705 | |
| SQC023438 | protease 3C | 5144 | 5692 | 0 | 0 | 549 | |
| SQC023439 | 2A (P2-A) | 3152 | 3577 | 0 | 0 | 426 | |
| SQC023440 | 2B (P2-B) | 3578 | 3874 | 0 | 0 | 297 | |
| SQC023441 | 3A (P3-A) | 4853 | 5077 | 0 | 0 | 225 | |
| SQC023442 | 1A (VP4) | 614 | 814 | 0 | 0 | 201 | |
| SQC023443 | 3B (VPg) | 5078 | 5143 | 0 | 0 | 66 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC020014 | CDS | 1 | 2153 | 0 | 0 | 2153 | |
| SPC020053 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC020135 | 3D | 1694 | 2153 | 0 | 0 | 460 | |
| SPC020136 | 2C (P2-C) | 1088 | 1413 | 0 | 0 | 326 | |
| SPC020137 | 1D (VP1) | 568 | 846 | 0 | 0 | 279 | |
| SPC020138 | 1B (VP2) | 68 | 332 | 0 | 0 | 265 | |
| SPC020139 | 1C (VP3) | 333 | 567 | 0 | 0 | 235 | |
| SPC020140 | protease 3C | 1511 | 1693 | 0 | 0 | 183 | |
| SPC020141 | 2A (P2-A) | 847 | 988 | 0 | 0 | 142 | |
| SPC020142 | 2B (P2-B) | 989 | 1087 | 0 | 0 | 99 | |
| SPC020143 | 3A (P3-A) | 1414 | 1488 | 0 | 0 | 75 | |
| SPC020144 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC020145 | 3B (VPg) | 1489 | 1510 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |