| RVdb StrainID | CNS07299 | GenBank Accession | OP342697.1 |
| Species | RVC | Sequence Length | 7049 nt |
| Serotype | 15 Checked by RVdb | Serotype (GenBank) | 15 |
| Definition | Rhinovirus C15 strain RVC15/China/2018/BJR73 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVC15/China/2018/BJR73 | Sampling Date | 2018-02-06 |
| Sampling Country | China | Sampling location | Beijing |
| Isolation Source | -N/A- | NCBI Taxon ID | 1418033 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC023415 | 5'UTR | 1 | 584 | 0 | 0 | 584 | |
| SQC023416 | CDS | 585 | 7046 | 0 | 0 | 6462 | |
| SQC023417 | VP4/2 | 585 | 1019 | 0 | 0 | 435 | |
| SQC023418 | 3D | 5664 | 7043 | 0 | 0 | 1380 | |
| SQC023419 | 2C (P2-C) | 3846 | 4823 | 0 | 0 | 978 | |
| SQC023420 | 1D (VP1) | 2286 | 3122 | 0 | 0 | 837 | |
| SQC023421 | 1B (VP2) | 786 | 1580 | 0 | 0 | 795 | |
| SQC023422 | 1C (VP3) | 1581 | 2285 | 0 | 0 | 705 | |
| SQC023423 | protease 3C | 5115 | 5663 | 0 | 0 | 549 | |
| SQC023424 | 2A (P2-A) | 3123 | 3548 | 0 | 0 | 426 | |
| SQC023425 | 2B (P2-B) | 3549 | 3845 | 0 | 0 | 297 | |
| SQC023426 | 3A (P3-A) | 4824 | 5048 | 0 | 0 | 225 | |
| SQC023427 | 1A (VP4) | 585 | 785 | 0 | 0 | 201 | |
| SQC023428 | 3B (VPg) | 5049 | 5114 | 0 | 0 | 66 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC020015 | CDS | 1 | 2153 | 0 | 0 | 2153 | |
| SPC020054 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC020146 | 3D | 1694 | 2153 | 0 | 0 | 460 | |
| SPC020147 | 2C (P2-C) | 1088 | 1413 | 0 | 0 | 326 | |
| SPC020148 | 1D (VP1) | 568 | 846 | 0 | 0 | 279 | |
| SPC020149 | 1B (VP2) | 68 | 332 | 0 | 0 | 265 | |
| SPC020150 | 1C (VP3) | 333 | 567 | 0 | 0 | 235 | |
| SPC020151 | protease 3C | 1511 | 1693 | 0 | 0 | 183 | |
| SPC020152 | 2A (P2-A) | 847 | 988 | 0 | 0 | 142 | |
| SPC020153 | 2B (P2-B) | 989 | 1087 | 0 | 0 | 99 | |
| SPC020154 | 3A (P3-A) | 1414 | 1488 | 0 | 0 | 75 | |
| SPC020155 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC020156 | 3B (VPg) | 1489 | 1510 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |