| RVdb StrainID | CNS07298 | GenBank Accession | OP342696.1 |
| Species | RVC | Sequence Length | 7090 nt |
| Serotype | 22 Checked by RVdb | Serotype (GenBank) | 22 |
| Definition | Rhinovirus C22 strain RVC22/China/2014/HBH41 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVC22/China/2014/HBH41 | Sampling Date | 2014-10-27 |
| Sampling Country | China | Sampling location | Hebei |
| Isolation Source | -N/A- | NCBI Taxon ID | 1418070 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC023400 | 3'UTR | 7035 | 7090 | 0 | 0 | 56 | |
| SQC023401 | 5'UTR | 1 | 611 | 0 | 0 | 611 | |
| SQC023402 | CDS | 612 | 7034 | 0 | 0 | 6423 | |
| SQC023403 | VP4/2 | 612 | 1041 | 0 | 0 | 430 | |
| SQC023404 | 3D | 5652 | 7031 | 0 | 0 | 1380 | |
| SQC023405 | 2C (P2-C) | 3834 | 4808 | 0 | 0 | 975 | |
| SQC023406 | 1D (VP1) | 2301 | 3116 | 0 | 0 | 816 | |
| SQC023407 | 1B (VP2) | 819 | 1601 | 0 | 0 | 783 | |
| SQC023408 | 1C (VP3) | 1602 | 2300 | 0 | 0 | 699 | |
| SQC023409 | protease 3C | 5103 | 5651 | 0 | 0 | 549 | |
| SQC023410 | 2A (P2-A) | 3117 | 3542 | 0 | 0 | 426 | |
| SQC023411 | 2B (P2-B) | 3543 | 3833 | 0 | 0 | 291 | |
| SQC023412 | 3A (P3-A) | 4809 | 5036 | 0 | 0 | 228 | |
| SQC023413 | 1A (VP4) | 612 | 818 | 0 | 0 | 207 | |
| SQC023414 | 3B (VPg) | 5037 | 5102 | 0 | 0 | 66 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC020046 | CDS | 1 | 2140 | 0 | 0 | 2140 | |
| SPC020085 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC020486 | 3D | 1681 | 2140 | 0 | 0 | 460 | |
| SPC020487 | 2C (P2-C) | 1075 | 1399 | 0 | 0 | 325 | |
| SPC020488 | 1D (VP1) | 564 | 835 | 0 | 0 | 272 | |
| SPC020489 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
| SPC020490 | 1C (VP3) | 331 | 563 | 0 | 0 | 233 | |
| SPC020491 | protease 3C | 1498 | 1680 | 0 | 0 | 183 | |
| SPC020492 | 2A (P2-A) | 836 | 977 | 0 | 0 | 142 | |
| SPC020493 | 2B (P2-B) | 978 | 1074 | 0 | 0 | 97 | |
| SPC020494 | 3A (P3-A) | 1400 | 1475 | 0 | 0 | 76 | |
| SPC020495 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPC020496 | 3B (VPg) | 1476 | 1497 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |