| RVdb StrainID | CNS07296 | GenBank Accession | OP342694.1 |
| Species | RVC | Sequence Length | 7122 nt |
| Serotype | 26 Checked by RVdb | Serotype (GenBank) | 26 |
| Definition | Rhinovirus C26 strain RVC26/China/2017/BJR5 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVC26/China/2017/BJR5 | Sampling Date | 2017-01-29 |
| Sampling Country | China | Sampling location | Beijing |
| Isolation Source | -N/A- | NCBI Taxon ID | 2045069 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC023371 | 5'UTR | 1 | 640 | 0 | 0 | 640 | |
| SQC023372 | CDS | 641 | 7078 | 0 | 0 | 6438 | |
| SQC023373 | VP4/2 | 641 | 1070 | 0 | 0 | 430 | |
| SQC023374 | 3D | 5696 | 7075 | 0 | 0 | 1380 | |
| SQC023375 | 2C (P2-C) | 3881 | 4855 | 0 | 0 | 975 | |
| SQC023376 | 1D (VP1) | 2336 | 3157 | 0 | 0 | 822 | |
| SQC023377 | 1B (VP2) | 848 | 1627 | 0 | 0 | 780 | |
| SQC023378 | 1C (VP3) | 1628 | 2335 | 0 | 0 | 708 | |
| SQC023379 | protease 3C | 5147 | 5695 | 0 | 0 | 549 | |
| SQC023380 | 2A (P2-A) | 3158 | 3583 | 0 | 0 | 426 | |
| SQC023381 | 2B (P2-B) | 3584 | 3880 | 0 | 0 | 297 | |
| SQC023382 | 3A (P3-A) | 4856 | 5080 | 0 | 0 | 225 | |
| SQC023383 | 1A (VP4) | 641 | 847 | 0 | 0 | 207 | |
| SQC023384 | 3B (VPg) | 5081 | 5146 | 0 | 0 | 66 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC020028 | CDS | 1 | 2145 | 0 | 0 | 2145 | |
| SPC020067 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC020289 | 3D | 1686 | 2145 | 0 | 0 | 460 | |
| SPC020290 | 2C (P2-C) | 1081 | 1405 | 0 | 0 | 325 | |
| SPC020291 | 1D (VP1) | 566 | 839 | 0 | 0 | 274 | |
| SPC020292 | 1B (VP2) | 70 | 329 | 0 | 0 | 260 | |
| SPC020293 | 1C (VP3) | 330 | 565 | 0 | 0 | 236 | |
| SPC020294 | protease 3C | 1503 | 1685 | 0 | 0 | 183 | |
| SPC020295 | 2A (P2-A) | 840 | 981 | 0 | 0 | 142 | |
| SPC020296 | 2B (P2-B) | 982 | 1080 | 0 | 0 | 99 | |
| SPC020297 | 3A (P3-A) | 1406 | 1480 | 0 | 0 | 75 | |
| SPC020298 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPC020299 | 3B (VPg) | 1481 | 1502 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |