| RVdb StrainID | CNS07295 | GenBank Accession | OP342693.1 |
| Species | RVC | Sequence Length | 7104 nt |
| Serotype | 35 Checked by RVdb | Serotype (GenBank) | 35 |
| Definition | Rhinovirus C35 strain RVC35/China/2018/BJR11 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVC35/China/2018/BJR11 | Sampling Date | 2018-01-30 |
| Sampling Country | China | Sampling location | Beijing |
| Isolation Source | -N/A- | NCBI Taxon ID | 1077430 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC023356 | 3'UTR | 7052 | 7091 | 0 | 0 | 40 | |
| SQC023357 | 5'UTR | 1 | 622 | 0 | 0 | 622 | |
| SQC023358 | CDS | 623 | 7051 | 0 | 0 | 6429 | |
| SQC023359 | VP4/2 | 623 | 1057 | 0 | 0 | 435 | |
| SQC023360 | 3D | 5669 | 7048 | 0 | 0 | 1380 | |
| SQC023361 | 2C (P2-C) | 3851 | 4828 | 0 | 0 | 978 | |
| SQC023362 | 1D (VP1) | 2315 | 3130 | 0 | 0 | 816 | |
| SQC023363 | 1B (VP2) | 830 | 1606 | 0 | 0 | 777 | |
| SQC023364 | 1C (VP3) | 1607 | 2314 | 0 | 0 | 708 | |
| SQC023365 | protease 3C | 5120 | 5668 | 0 | 0 | 549 | |
| SQC023366 | 2A (P2-A) | 3131 | 3553 | 0 | 0 | 423 | |
| SQC023367 | 2B (P2-B) | 3554 | 3850 | 0 | 0 | 297 | |
| SQC023368 | 3A (P3-A) | 4829 | 5053 | 0 | 0 | 225 | |
| SQC023369 | 1A (VP4) | 623 | 829 | 0 | 0 | 207 | |
| SQC023370 | 3B (VPg) | 5054 | 5119 | 0 | 0 | 66 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC020044 | CDS | 1 | 2142 | 0 | 0 | 2142 | |
| SPC020083 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC020465 | 3D | 1683 | 2142 | 0 | 0 | 460 | |
| SPC020466 | 2C (P2-C) | 1077 | 1402 | 0 | 0 | 326 | |
| SPC020467 | 1D (VP1) | 565 | 836 | 0 | 0 | 272 | |
| SPC020468 | 1B (VP2) | 70 | 328 | 0 | 0 | 259 | |
| SPC020469 | 1C (VP3) | 329 | 564 | 0 | 0 | 236 | |
| SPC020470 | protease 3C | 1500 | 1682 | 0 | 0 | 183 | |
| SPC020471 | 2A (P2-A) | 837 | 977 | 0 | 0 | 141 | |
| SPC020472 | 2B (P2-B) | 978 | 1076 | 0 | 0 | 99 | |
| SPC020473 | 3A (P3-A) | 1403 | 1477 | 0 | 0 | 75 | |
| SPC020474 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPC020475 | 3B (VPg) | 1478 | 1499 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |