| RVdb StrainID | CNS05938 | GenBank Accession | EU743926.1 |
| Species | RVC | Sequence Length | 408 nt |
| Serotype | -N/A- | Serotype (GenBank) | -N/A- |
| Definition | Human rhinovirus C isolate HRV-CO-1396 VP4/2 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | HRV-CO-1396 | Sampling Date | from 2004-12 to 2005-07 |
| Sampling Country | USA | Sampling location | Colorado |
| Isolation Source | nasopharyngeal wash from patient | NCBI Taxon ID | 463676 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC017464 | 1A (VP4) | 16 | 216 | 0 | 0 | 201 | |
| SQC017465 | CDS | 16 | 0 | 0 | 1 | 393 | |
| SQC017466 | VP4/2 | 16 | 0 | 0 | 1 | 393 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC000367 | CDS | 1 | 131 | 0 | 1 | 131 | |
| SPC000368 | VP4/2 | 1 | 131 | 0 | 1 | 131 | |
| SPC000369 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 18674964 | Multiplex MassTag-PCR for respiratory pathogens in pediatric nasopharyngeal washes negative by conventional diagnostic testing shows a high prevalence of viruses belonging to a newly recognized rhinovirus clade. | 2008 | J Clin Virol | View More |