| RVdb StrainID | CNS05743 | GenBank Accession | GQ223227.1 |
| Species | RVC | Sequence Length | 7107 nt |
| Serotype | 8 Checked by RVdb | Serotype (GenBank) | 8 |
| Definition | Rhinovirus C8 isolate N4, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | N4 | Sampling Date | 2006-12-07 |
| Sampling Country | China | Sampling location | Shanghai Nanxiang Hospital |
| Isolation Source | nasopharyngeal aspirate of child | NCBI Taxon ID | 1219380 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC017363 | 1A (VP4) | 620 | 820 | 0 | 0 | 201 | |
| SQC017364 | 1B (VP2) | 821 | 1605 | 0 | 0 | 785 | |
| SQC017365 | 1C (VP3) | 1606 | 2320 | 0 | 0 | 715 | |
| SQC017366 | 1D (VP1) | 2321 | 3160 | 0 | 0 | 840 | |
| SQC017367 | 2A (P2-A) | 3161 | 3568 | 0 | 0 | 408 | |
| SQC017368 | 2B (P2-B) | 3569 | 3865 | 0 | 0 | 297 | |
| SQC017369 | 2C (P2-C) | 3866 | 4843 | 0 | 0 | 978 | |
| SQC017370 | 3'UTR | 7067 | 7107 | 0 | 0 | 41 | |
| SQC017371 | 3A (P3-A) | 4844 | 5068 | 0 | 0 | 225 | |
| SQC017372 | 3B (VPg) | 5069 | 5134 | 0 | 0 | 66 | |
| SQC017373 | 3D | 5684 | 7063 | 0 | 0 | 1380 | |
| SQC017374 | 5'UTR | 1 | 619 | 0 | 0 | 619 | |
| SQC017375 | CDS | 620 | 7066 | 0 | 0 | 6447 | |
| SQC017376 | protease 3C | 5135 | 5683 | 0 | 0 | 549 | |
| SQC017377 | VP4/2 | 620 | 1050 | 0 | 0 | 431 | |
| SQC017378 | genome | 1 | 7107 | 0 | 0 | 7107 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC000508 | CDS | 1 | 2148 | 0 | 0 | 2148 | |
| SPC000509 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC000510 | 3D | 1689 | 2148 | 0 | 0 | 460 | |
| SPC000511 | 2C (P2-C) | 1083 | 1408 | 0 | 0 | 326 | |
| SPC000512 | 1D (VP1) | 566 | 841 | 0 | 0 | 276 | |
| SPC000513 | 1B (VP2) | 68 | 329 | 0 | 0 | 262 | |
| SPC000514 | 1C (VP3) | 330 | 565 | 0 | 0 | 236 | |
| SPC000515 | protease 3C | 1506 | 1688 | 0 | 0 | 183 | |
| SPC000516 | 2A (P2-A) | 842 | 983 | 0 | 0 | 142 | |
| SPC000517 | 2B (P2-B) | 984 | 1082 | 0 | 0 | 99 | |
| SPC000518 | 3A (P3-A) | 1409 | 1483 | 0 | 0 | 75 | |
| SPC000519 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC000520 | 3B (VPg) | 1484 | 1505 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19633719 | Evidence of recombination and genetic diversity in human rhinoviruses in children with acute respiratory infection. | 2009 | PLoS One | View More |