| RVdb StrainID | CNS04098 | GenBank Accession | KJ675506.1 |
| Species | RVC | Sequence Length | 7112 nt |
| Serotype | 23 Checked by RVdb | Serotype (GenBank) | 23 |
| Definition | Rhinovirus C isolate 8713-MY-10, complete genome | GenBank Submission Date | 2022-11-03 |
| Strain Name | 8713-MY-10 | Sampling Date | 2010-11-10 |
| Sampling Country | Malaysia | Sampling location | University Malaya Medical Center (UMMC) |
| Isolation Source | nasopharyngeal swab from patient with acute exacerbation bronchial asthma (AEBA) | NCBI Taxon ID | 463676 |
| Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC016475 | 1A (VP4) | 616 | 816 | 0 | 0 | 201 | |
| SQC016476 | 1B (VP2) | 817 | 1617 | 0 | 0 | 801 | |
| SQC016477 | 1C (VP3) | 1618 | 2325 | 0 | 0 | 708 | |
| SQC016478 | 1D (VP1) | 2326 | 3150 | 0 | 0 | 825 | |
| SQC016479 | 2A (P2-A) | 3151 | 3576 | 0 | 0 | 426 | |
| SQC016480 | 2B (P2-B) | 3577 | 3873 | 0 | 0 | 297 | |
| SQC016481 | 2C (P2-C) | 3874 | 4851 | 0 | 0 | 978 | |
| SQC016482 | 3'UTR | 7075 | 7112 | 0 | 0 | 38 | |
| SQC016483 | 3A (P3-A) | 4852 | 5076 | 0 | 0 | 225 | |
| SQC016484 | 3B (VPg) | 5077 | 5142 | 0 | 0 | 66 | |
| SQC016485 | 3D | 5692 | 7071 | 0 | 0 | 1380 | |
| SQC016486 | 5'UTR | 1 | 615 | 0 | 0 | 615 | |
| SQC016487 | CDS | 616 | 7074 | 0 | 0 | 6459 | |
| SQC016488 | protease 3C | 5143 | 5691 | 0 | 0 | 549 | |
| SQC016489 | VP4/2 | 616 | 1046 | 0 | 0 | 431 | |
| SQC016490 | genome | 1 | 7112 | 0 | 0 | 7112 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC005091 | CDS | 1 | 2152 | 0 | 0 | 2152 | |
| SPC005092 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC005093 | 3D | 1693 | 2152 | 0 | 0 | 460 | |
| SPC005094 | 2C (P2-C) | 1087 | 1412 | 0 | 0 | 326 | |
| SPC005095 | 1D (VP1) | 571 | 845 | 0 | 0 | 275 | |
| SPC005096 | 1B (VP2) | 68 | 334 | 0 | 0 | 267 | |
| SPC005097 | 1C (VP3) | 335 | 570 | 0 | 0 | 236 | |
| SPC005098 | protease 3C | 1510 | 1692 | 0 | 0 | 183 | |
| SPC005099 | 2A (P2-A) | 846 | 987 | 0 | 0 | 142 | |
| SPC005100 | 2B (P2-B) | 988 | 1086 | 0 | 0 | 99 | |
| SPC005101 | 3A (P3-A) | 1413 | 1487 | 0 | 0 | 75 | |
| SPC005102 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC005103 | 3B (VPg) | 1488 | 1509 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 27199901 | Comparative Genetic Analyses of Human Rhinovirus C (HRV-C) Complete Genome from Malaysia. | 2016 | Front Microbiol | View More |