| RVdb StrainID | CNS03633 | GenBank Accession | KP890663.1 |
| Species | RVC | Sequence Length | 7125 nt |
| Serotype | 12 Checked by RVdb | Serotype (GenBank) | 12 |
| Definition | Rhinovirus C isolate 3805-MY-10, complete genome | GenBank Submission Date | 2022-11-03 |
| Strain Name | 3805-MY-10 | Sampling Date | 2010-10-20 |
| Sampling Country | Malaysia | Sampling location | University Malaya Medical Center (UMMC) |
| Isolation Source | Nasopharyngeal aspirates from patient with bronchiolitis | NCBI Taxon ID | 463676 |
| Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC016241 | 1A (VP4) | 618 | 818 | 0 | 0 | 201 | |
| SQC016242 | 1B (VP2) | 819 | 1613 | 0 | 0 | 795 | |
| SQC016243 | 1C (VP3) | 1614 | 2324 | 0 | 0 | 711 | |
| SQC016244 | 1D (VP1) | 2325 | 3161 | 0 | 0 | 837 | |
| SQC016245 | 2A (P2-A) | 3162 | 3587 | 0 | 0 | 426 | |
| SQC016246 | 2B (P2-B) | 3588 | 3884 | 0 | 0 | 297 | |
| SQC016247 | 2C (P2-C) | 3885 | 4862 | 0 | 0 | 978 | |
| SQC016248 | 3'UTR | 7086 | 7125 | 0 | 0 | 40 | |
| SQC016249 | 3A (P3-A) | 4863 | 5087 | 0 | 0 | 225 | |
| SQC016250 | 3B (VPg) | 5088 | 5153 | 0 | 0 | 66 | |
| SQC016251 | 3D | 5703 | 7082 | 0 | 0 | 1380 | |
| SQC016252 | 5'UTR | 1 | 617 | 0 | 0 | 617 | |
| SQC016253 | CDS | 618 | 7085 | 0 | 0 | 6468 | |
| SQC016254 | protease 3C | 5154 | 5702 | 0 | 0 | 549 | |
| SQC016255 | VP4/2 | 618 | 1052 | 0 | 0 | 435 | |
| SQC016256 | genome | 1 | 7125 | 0 | 0 | 7125 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC005969 | CDS | 1 | 2155 | 0 | 0 | 2155 | |
| SPC005970 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC005971 | 3D | 1696 | 2155 | 0 | 0 | 460 | |
| SPC005972 | 2C (P2-C) | 1090 | 1415 | 0 | 0 | 326 | |
| SPC005973 | 1D (VP1) | 570 | 848 | 0 | 0 | 279 | |
| SPC005974 | 1B (VP2) | 68 | 332 | 0 | 0 | 265 | |
| SPC005975 | 1C (VP3) | 333 | 569 | 0 | 0 | 237 | |
| SPC005976 | protease 3C | 1513 | 1695 | 0 | 0 | 183 | |
| SPC005977 | 2A (P2-A) | 849 | 990 | 0 | 0 | 142 | |
| SPC005978 | 2B (P2-B) | 991 | 1089 | 0 | 0 | 99 | |
| SPC005979 | 3A (P3-A) | 1416 | 1490 | 0 | 0 | 75 | |
| SPC005980 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC005981 | 3B (VPg) | 1491 | 1512 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 27199901 | Comparative Genetic Analyses of Human Rhinovirus C (HRV-C) Complete Genome from Malaysia. | 2016 | Front Microbiol | View More |