| RVdb StrainID | CNS01223 | GenBank Accession | MT641406.1 |
| Species | RVC | Sequence Length | 2491 nt |
| Serotype | -N/A- | Serotype (GenBank) | -N/A- |
| Definition | Rhinovirus C strain CLI-B3-14-RhinoC polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | CLI-B3-14-RhinoC | Sampling Date | 2018-06-24 |
| Sampling Country | United Kingdom | Sampling location | Public Health England (PHE) |
| Isolation Source | respiratory | NCBI Taxon ID | 463676 |
| Sequencing Technology | Illumina | Assembly Method | Geneious v. 2020.0.3 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC015003 | 1A (VP4) | 76 | 276 | 0 | 0 | 201 | |
| SQC015004 | 1B (VP2) | 277 | 1071 | 0 | 0 | 795 | |
| SQC015005 | 1C (VP3) | 1072 | 1785 | 0 | 0 | 714 | |
| SQC015006 | 1D (VP1) | 1786 | 0 | 0 | 1 | 706 | |
| SQC015007 | CDS | 76 | 0 | 0 | 1 | 2416 | |
| SQC015008 | VP4/2 | 76 | 506 | 0 | 0 | 431 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC011558 | CDS | 1 | 805 | 0 | 1 | 805 | |
| SPC011559 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC011560 | 1B (VP2) | 68 | 332 | 0 | 0 | 265 | |
| SPC011561 | 1D (VP1) | 568 | 805 | 0 | 1 | 238 | |
| SPC011562 | 1C (VP3) | 333 | 567 | 0 | 0 | 235 | |
| SPC011563 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 33918088 | Detection and Typing of Human Enteroviruses from Clinical Samples by Entire-Capsid Next Generation Sequencing. | 2021 | Viruses | View More |