| RVdb StrainID | CNS00008 | GenBank Accession | ON729335.1 |
| Species | RVC | Sequence Length | 7060 nt |
| Serotype | 34 Checked by RVdb | Serotype (GenBank) | 34 |
| Definition | Rhinovirus C34 strain SC647, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | SC647 | Sampling Date | 2017 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 2045075 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC013432 | 1A (VP4) | 583 | 783 | 0 | 0 | 201 | |
| SQC013433 | 1B (VP2) | 784 | 1569 | 0 | 0 | 786 | |
| SQC013434 | 1C (VP3) | 1570 | 2286 | 0 | 0 | 717 | |
| SQC013435 | 1D (VP1) | 2287 | 3114 | 0 | 0 | 828 | |
| SQC013436 | 2A (P2-A) | 3115 | 3540 | 0 | 0 | 426 | |
| SQC013437 | 2B (P2-B) | 3541 | 3837 | 0 | 0 | 297 | |
| SQC013438 | 2C (P2-C) | 3838 | 4815 | 0 | 0 | 978 | |
| SQC013439 | 3A (P3-A) | 4816 | 5040 | 0 | 0 | 225 | |
| SQC013440 | 3B (VPg) | 5041 | 5106 | 0 | 0 | 66 | |
| SQC013441 | 3D | 5656 | 7035 | 0 | 0 | 1380 | |
| SQC013442 | 5'UTR | 0 | 582 | 1 | 0 | 582 | |
| SQC013443 | CDS | 583 | 7038 | 0 | 0 | 6456 | |
| SQC013444 | protease 3C | 5107 | 5655 | 0 | 0 | 549 | |
| SQC013445 | VP4/2 | 583 | 1013 | 0 | 0 | 431 | |
| SQC013446 | genome | 1 | 7060 | 1 | 1 | 7060 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC017826 | CDS | 1 | 2151 | 0 | 0 | 2151 | |
| SPC017827 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC017828 | 3D | 1692 | 2151 | 0 | 0 | 460 | |
| SPC017829 | 2C (P2-C) | 1086 | 1411 | 0 | 0 | 326 | |
| SPC017830 | 1D (VP1) | 569 | 844 | 0 | 0 | 276 | |
| SPC017831 | 1B (VP2) | 68 | 329 | 0 | 0 | 262 | |
| SPC017832 | 1C (VP3) | 330 | 568 | 0 | 0 | 239 | |
| SPC017833 | protease 3C | 1509 | 1691 | 0 | 0 | 183 | |
| SPC017834 | 2A (P2-A) | 845 | 986 | 0 | 0 | 142 | |
| SPC017835 | 2B (P2-B) | 987 | 1085 | 0 | 0 | 99 | |
| SPC017836 | 3A (P3-A) | 1412 | 1486 | 0 | 0 | 75 | |
| SPC017837 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC017838 | 3B (VPg) | 1487 | 1508 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |