| RVdb StrainID | CNP05742 | GenBank Accession | GQ223228.1 |
| Species | RVC | Sequence Length | 7111 nt |
| Serotype | 9 Checked by RVdb | Serotype (GenBank) | 9 |
| Definition | Rhinovirus C9 isolate N10, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | N10 | Sampling Date | 2007-06-14 |
| Sampling Country | China | Sampling location | Shanghai Nanxiang Hospital |
| Isolation Source | -N/A- | NCBI Taxon ID | 1220265 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC012906 | 1A (VP4) | 640 | 840 | 0 | 0 | 201 | |
| SQC012907 | 1B (VP2) | 841 | 1626 | 0 | 0 | 786 | |
| SQC012908 | 1C (VP3) | 1627 | 2331 | 0 | 0 | 705 | |
| SQC012909 | 1D (VP1) | 2332 | 3147 | 0 | 0 | 816 | |
| SQC012910 | 2A (P2-A) | 3148 | 3573 | 0 | 0 | 426 | |
| SQC012911 | 2B (P2-B) | 3574 | 3870 | 0 | 0 | 297 | |
| SQC012912 | 2C (P2-C) | 3871 | 4848 | 0 | 0 | 978 | |
| SQC012913 | 3'UTR | 7072 | 7111 | 0 | 0 | 40 | |
| SQC012914 | 3A (P3-A) | 4849 | 5073 | 0 | 0 | 225 | |
| SQC012915 | 3B (VPg) | 5074 | 5139 | 0 | 0 | 66 | |
| SQC012916 | 3D | 5689 | 7068 | 0 | 0 | 1380 | |
| SQC012917 | 5'UTR | 1 | 639 | 0 | 0 | 639 | |
| SQC012918 | CDS | 640 | 7071 | 0 | 0 | 6432 | |
| SQC012919 | protease 3C | 5140 | 5688 | 0 | 0 | 549 | |
| SQC012920 | VP4/2 | 640 | 1074 | 0 | 0 | 435 | |
| SQC012921 | genome | 1 | 7111 | 0 | 0 | 7111 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC000521 | CDS | 1 | 2143 | 0 | 0 | 2143 | |
| SPC000522 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC000523 | 3D | 1684 | 2143 | 0 | 0 | 460 | |
| SPC000524 | 2C (P2-C) | 1078 | 1403 | 0 | 0 | 326 | |
| SPC000525 | 1D (VP1) | 565 | 836 | 0 | 0 | 272 | |
| SPC000526 | 1B (VP2) | 68 | 329 | 0 | 0 | 262 | |
| SPC000527 | 1C (VP3) | 330 | 564 | 0 | 0 | 235 | |
| SPC000528 | protease 3C | 1501 | 1683 | 0 | 0 | 183 | |
| SPC000529 | 2A (P2-A) | 837 | 978 | 0 | 0 | 142 | |
| SPC000530 | 2B (P2-B) | 979 | 1077 | 0 | 0 | 99 | |
| SPC000531 | 3A (P3-A) | 1404 | 1478 | 0 | 0 | 75 | |
| SPC000532 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC000533 | 3B (VPg) | 1479 | 1500 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19633719 | Evidence of recombination and genetic diversity in human rhinoviruses in children with acute respiratory infection. | 2009 | PLoS One | View More |