| RVdb StrainID | CNP04097 | GenBank Accession | KJ675507.1 |
| Species | RVC | Sequence Length | 7090 nt |
| Serotype | 22 Checked by RVdb | Serotype (GenBank) | 22 |
| Definition | Rhinovirus C isolate 3430-MY-10, complete genome | GenBank Submission Date | 2022-11-03 |
| Strain Name | 3430-MY-10 | Sampling Date | 2010-11-07 |
| Sampling Country | Malaysia | Sampling location | University Malaya Medical Center (UMMC) |
| Isolation Source | sputum from patient with acute bronchiolitis | NCBI Taxon ID | 463676 |
| Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQC012005 | 1A (VP4) | 612 | 812 | 0 | 0 | 201 | |
| SQC012006 | 1B (VP2) | 813 | 1601 | 0 | 0 | 789 | |
| SQC012007 | 1C (VP3) | 1602 | 2300 | 0 | 0 | 699 | |
| SQC012008 | 1D (VP1) | 2301 | 3116 | 0 | 0 | 816 | |
| SQC012009 | 2A (P2-A) | 3117 | 3542 | 0 | 0 | 426 | |
| SQC012010 | 2B (P2-B) | 3543 | 3833 | 0 | 0 | 291 | |
| SQC012011 | 2C (P2-C) | 3834 | 4808 | 0 | 0 | 975 | |
| SQC012012 | 3'UTR | 7035 | 7090 | 0 | 0 | 56 | |
| SQC012013 | 3A (P3-A) | 4809 | 5036 | 0 | 0 | 228 | |
| SQC012014 | 3B (VPg) | 5037 | 5102 | 0 | 0 | 66 | |
| SQC012015 | 3D | 5652 | 7031 | 0 | 0 | 1380 | |
| SQC012016 | 5'UTR | 1 | 611 | 0 | 0 | 611 | |
| SQC012017 | CDS | 612 | 7034 | 0 | 0 | 6423 | |
| SQC012018 | protease 3C | 5103 | 5651 | 0 | 0 | 549 | |
| SQC012019 | VP4/2 | 612 | 1042 | 0 | 0 | 431 | |
| SQC012020 | genome | 1 | 7090 | 0 | 0 | 7090 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPC005104 | CDS | 1 | 2140 | 0 | 0 | 2140 | |
| SPC005105 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPC005106 | 3D | 1681 | 2140 | 0 | 0 | 460 | |
| SPC005107 | 2C (P2-C) | 1075 | 1399 | 0 | 0 | 325 | |
| SPC005108 | 1D (VP1) | 564 | 835 | 0 | 0 | 272 | |
| SPC005109 | 1B (VP2) | 68 | 330 | 0 | 0 | 263 | |
| SPC005110 | 1C (VP3) | 331 | 563 | 0 | 0 | 233 | |
| SPC005111 | protease 3C | 1498 | 1680 | 0 | 0 | 183 | |
| SPC005112 | 2A (P2-A) | 836 | 977 | 0 | 0 | 142 | |
| SPC005113 | 2B (P2-B) | 978 | 1074 | 0 | 0 | 97 | |
| SPC005114 | 3A (P3-A) | 1400 | 1475 | 0 | 0 | 76 | |
| SPC005115 | 1A (VP4) | 1 | 67 | 0 | 0 | 67 | |
| SPC005116 | 3B (VPg) | 1476 | 1497 | 0 | 0 | 22 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 27199901 | Comparative Genetic Analyses of Human Rhinovirus C (HRV-C) Complete Genome from Malaysia. | 2016 | Front Microbiol | View More |